Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Cdhr3Q8BL00 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdhr3Q8BL00 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.58■□□□□ 0.4
Cdhr3Q8BL00 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdhr3Q8BL00 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdhr3Q8BL00 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdhr3Q8BL00 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdhr3Q8BL00 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdhr3Q8BL00 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdhr3Q8BL00 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cdhr3Q8BL00 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cdhr3Q8BL00 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdhr3Q8BL00 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdhr3Q8BL00 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.57■□□□□ 0.4
Cdhr3Q8BL00 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdhr3Q8BL00 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdhr3Q8BL00 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdhr3Q8BL00 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cdhr3Q8BL00 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cdhr3Q8BL00 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdhr3Q8BL00 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdhr3Q8BL00 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cdhr3Q8BL00 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
Cdhr3Q8BL00 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdhr3Q8BL00 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.56■□□□□ 0.4
Cdhr3Q8BL00 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cdhr3Q8BL00 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdhr3Q8BL00 Gm13238-201ENSMUST00000117655 780 ntBASIC17.56■□□□□ 0.4
Cdhr3Q8BL00 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdhr3Q8BL00 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.56■□□□□ 0.4
Cdhr3Q8BL00 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Cdhr3Q8BL00 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdhr3Q8BL00 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdhr3Q8BL00 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdhr3Q8BL00 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdhr3Q8BL00 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdhr3Q8BL00 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Cdhr3Q8BL00 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cdhr3Q8BL00 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cdhr3Q8BL00 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.55■□□□□ 0.4
Cdhr3Q8BL00 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.55■□□□□ 0.4
Cdhr3Q8BL00 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.55■□□□□ 0.4
Cdhr3Q8BL00 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.55■□□□□ 0.4
Cdhr3Q8BL00 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.55■□□□□ 0.4
Cdhr3Q8BL00 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Cdhr3Q8BL00 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdhr3Q8BL00 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdhr3Q8BL00 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdhr3Q8BL00 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Cdhr3Q8BL00 Cap2-205ENSMUST00000225824 1634 ntBASIC17.54■□□□□ 0.4
Cdhr3Q8BL00 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdhr3Q8BL00 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cdhr3Q8BL00 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdhr3Q8BL00 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cdhr3Q8BL00 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.54■□□□□ 0.4
Cdhr3Q8BL00 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdhr3Q8BL00 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdhr3Q8BL00 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cdhr3Q8BL00 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.54■□□□□ 0.4
Cdhr3Q8BL00 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cdhr3Q8BL00 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cdhr3Q8BL00 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Cdhr3Q8BL00 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdhr3Q8BL00 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdhr3Q8BL00 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdhr3Q8BL00 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cdhr3Q8BL00 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdhr3Q8BL00 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Cdhr3Q8BL00 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdhr3Q8BL00 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.53■□□□□ 0.4
Cdhr3Q8BL00 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cdhr3Q8BL00 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdhr3Q8BL00 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Cdhr3Q8BL00 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdhr3Q8BL00 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdhr3Q8BL00 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdhr3Q8BL00 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdhr3Q8BL00 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cdhr3Q8BL00 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdhr3Q8BL00 Gm43566-201ENSMUST00000196851 808 ntBASIC17.52■□□□□ 0.4
Cdhr3Q8BL00 Gm10399-202ENSMUST00000202768 748 ntBASIC17.52■□□□□ 0.4
Cdhr3Q8BL00 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Cdhr3Q8BL00 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cdhr3Q8BL00 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cdhr3Q8BL00 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.51■□□□□ 0.39
Cdhr3Q8BL00 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdhr3Q8BL00 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Cdhr3Q8BL00 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cdhr3Q8BL00 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cdhr3Q8BL00 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Cdhr3Q8BL00 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdhr3Q8BL00 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdhr3Q8BL00 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdhr3Q8BL00 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdhr3Q8BL00 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdhr3Q8BL00 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cdhr3Q8BL00 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdhr3Q8BL00 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdhr3Q8BL00 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdhr3Q8BL00 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms