Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smg1Q8BKX6 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smg1Q8BKX6 Mir6982-201ENSMUST00000184354 68 ntBASIC17.35■□□□□ 0.37
Smg1Q8BKX6 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Smg1Q8BKX6 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Smg1Q8BKX6 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Smg1Q8BKX6 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smg1Q8BKX6 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smg1Q8BKX6 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Smg1Q8BKX6 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smg1Q8BKX6 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Smg1Q8BKX6 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
Smg1Q8BKX6 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.33■□□□□ 0.36
Smg1Q8BKX6 Gm12441-201ENSMUST00000121806 588 ntBASIC17.33■□□□□ 0.36
Smg1Q8BKX6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smg1Q8BKX6 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Smg1Q8BKX6 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smg1Q8BKX6 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.33■□□□□ 0.36
Smg1Q8BKX6 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.33■□□□□ 0.36
Smg1Q8BKX6 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smg1Q8BKX6 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.32■□□□□ 0.36
Smg1Q8BKX6 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smg1Q8BKX6 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Smg1Q8BKX6 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smg1Q8BKX6 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smg1Q8BKX6 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smg1Q8BKX6 Gm13168-201ENSMUST00000121771 632 ntBASIC17.32■□□□□ 0.36
Smg1Q8BKX6 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.32■□□□□ 0.36
Smg1Q8BKX6 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Smg1Q8BKX6 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smg1Q8BKX6 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smg1Q8BKX6 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smg1Q8BKX6 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smg1Q8BKX6 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smg1Q8BKX6 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.31■□□□□ 0.36
Smg1Q8BKX6 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smg1Q8BKX6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Smg1Q8BKX6 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smg1Q8BKX6 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smg1Q8BKX6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smg1Q8BKX6 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smg1Q8BKX6 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smg1Q8BKX6 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smg1Q8BKX6 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smg1Q8BKX6 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smg1Q8BKX6 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Smg1Q8BKX6 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.29■□□□□ 0.36
Smg1Q8BKX6 Gm43530-201ENSMUST00000195920 274 ntBASIC17.29■□□□□ 0.36
Smg1Q8BKX6 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smg1Q8BKX6 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smg1Q8BKX6 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Smg1Q8BKX6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Smg1Q8BKX6 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Smg1Q8BKX6 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smg1Q8BKX6 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smg1Q8BKX6 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smg1Q8BKX6 Gm8520-201ENSMUST00000186517 868 ntBASIC17.28■□□□□ 0.36
Smg1Q8BKX6 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smg1Q8BKX6 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smg1Q8BKX6 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.28■□□□□ 0.36
Smg1Q8BKX6 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.28■□□□□ 0.36
Smg1Q8BKX6 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smg1Q8BKX6 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smg1Q8BKX6 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smg1Q8BKX6 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.27■□□□□ 0.36
Smg1Q8BKX6 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smg1Q8BKX6 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smg1Q8BKX6 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Smg1Q8BKX6 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smg1Q8BKX6 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Smg1Q8BKX6 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smg1Q8BKX6 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smg1Q8BKX6 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smg1Q8BKX6 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smg1Q8BKX6 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smg1Q8BKX6 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smg1Q8BKX6 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.26■□□□□ 0.35
Smg1Q8BKX6 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smg1Q8BKX6 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.26■□□□□ 0.35
Smg1Q8BKX6 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smg1Q8BKX6 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smg1Q8BKX6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smg1Q8BKX6 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Smg1Q8BKX6 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smg1Q8BKX6 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smg1Q8BKX6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smg1Q8BKX6 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Smg1Q8BKX6 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.25■□□□□ 0.35
Smg1Q8BKX6 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.25■□□□□ 0.35
Smg1Q8BKX6 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.25■□□□□ 0.35
Smg1Q8BKX6 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.25■□□□□ 0.35
Smg1Q8BKX6 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smg1Q8BKX6 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smg1Q8BKX6 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smg1Q8BKX6 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smg1Q8BKX6 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smg1Q8BKX6 Reep4-203ENSMUST00000226563 1444 ntBASIC17.24■□□□□ 0.35
Smg1Q8BKX6 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smg1Q8BKX6 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Smg1Q8BKX6 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms