Protein–RNA interactions for Protein: Q8BKS9

Pum3, Pumilio homolog 3, mousemouse

Known RBP Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pum3Q8BKS9 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.31■■□□□ 1
Pum3Q8BKS9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pum3Q8BKS9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Pum3Q8BKS9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pum3Q8BKS9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.31■■□□□ 1
Pum3Q8BKS9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pum3Q8BKS9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.31■■□□□ 1
Pum3Q8BKS9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Pum3Q8BKS9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Pum3Q8BKS9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pum3Q8BKS9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Pum3Q8BKS9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Pum3Q8BKS9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pum3Q8BKS9 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Pum3Q8BKS9 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Pum3Q8BKS9 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pum3Q8BKS9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pum3Q8BKS9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pum3Q8BKS9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pum3Q8BKS9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pum3Q8BKS9 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.3■■□□□ 1
Pum3Q8BKS9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pum3Q8BKS9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pum3Q8BKS9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.29■■□□□ 1
Pum3Q8BKS9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Pum3Q8BKS9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Pum3Q8BKS9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pum3Q8BKS9 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pum3Q8BKS9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pum3Q8BKS9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pum3Q8BKS9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pum3Q8BKS9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pum3Q8BKS9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pum3Q8BKS9 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pum3Q8BKS9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Pum3Q8BKS9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pum3Q8BKS9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pum3Q8BKS9 Mir6236-201ENSMUST00000184437 123 ntBASIC21.28■■□□□ 1
Pum3Q8BKS9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
Pum3Q8BKS9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.28■■□□□ 1
Pum3Q8BKS9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pum3Q8BKS9 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Pum3Q8BKS9 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pum3Q8BKS9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Pum3Q8BKS9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Pum3Q8BKS9 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.27■■□□□ 1
Pum3Q8BKS9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.27■■□□□ 1
Pum3Q8BKS9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pum3Q8BKS9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Pum3Q8BKS9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pum3Q8BKS9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Pum3Q8BKS9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.27■■□□□ 1
Pum3Q8BKS9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.27■■□□□ 1
Pum3Q8BKS9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Pum3Q8BKS9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pum3Q8BKS9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pum3Q8BKS9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pum3Q8BKS9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pum3Q8BKS9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pum3Q8BKS9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.26■□□□□ 0.99
Pum3Q8BKS9 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pum3Q8BKS9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.26■□□□□ 0.99
Pum3Q8BKS9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.26■□□□□ 0.99
Pum3Q8BKS9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Pum3Q8BKS9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pum3Q8BKS9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pum3Q8BKS9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.25■□□□□ 0.99
Pum3Q8BKS9 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pum3Q8BKS9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.25■□□□□ 0.99
Pum3Q8BKS9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.25■□□□□ 0.99
Pum3Q8BKS9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pum3Q8BKS9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pum3Q8BKS9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pum3Q8BKS9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pum3Q8BKS9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
Pum3Q8BKS9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pum3Q8BKS9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Pum3Q8BKS9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pum3Q8BKS9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pum3Q8BKS9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pum3Q8BKS9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pum3Q8BKS9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pum3Q8BKS9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
Pum3Q8BKS9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pum3Q8BKS9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pum3Q8BKS9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pum3Q8BKS9 Gm12821-201ENSMUST00000120022 600 ntBASIC21.23■□□□□ 0.99
Pum3Q8BKS9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.23■□□□□ 0.99
Pum3Q8BKS9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pum3Q8BKS9 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.23■□□□□ 0.99
Pum3Q8BKS9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pum3Q8BKS9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.23■□□□□ 0.99
Pum3Q8BKS9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Pum3Q8BKS9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pum3Q8BKS9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pum3Q8BKS9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Pum3Q8BKS9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pum3Q8BKS9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pum3Q8BKS9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pum3Q8BKS9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms