Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdh20Q8BIZ0 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.56■□□□□ 0.72
Pcdh20Q8BIZ0 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.56■□□□□ 0.72
Pcdh20Q8BIZ0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdh20Q8BIZ0 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.55■□□□□ 0.72
Pcdh20Q8BIZ0 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdh20Q8BIZ0 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.55■□□□□ 0.72
Pcdh20Q8BIZ0 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.55■□□□□ 0.72
Pcdh20Q8BIZ0 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.55■□□□□ 0.72
Pcdh20Q8BIZ0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdh20Q8BIZ0 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdh20Q8BIZ0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdh20Q8BIZ0 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdh20Q8BIZ0 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.54■□□□□ 0.72
Pcdh20Q8BIZ0 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Pcdh20Q8BIZ0 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdh20Q8BIZ0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdh20Q8BIZ0 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdh20Q8BIZ0 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdh20Q8BIZ0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdh20Q8BIZ0 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdh20Q8BIZ0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdh20Q8BIZ0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdh20Q8BIZ0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Pcdh20Q8BIZ0 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.53■□□□□ 0.72
Pcdh20Q8BIZ0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdh20Q8BIZ0 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdh20Q8BIZ0 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdh20Q8BIZ0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdh20Q8BIZ0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdh20Q8BIZ0 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdh20Q8BIZ0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.52■□□□□ 0.72
Pcdh20Q8BIZ0 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.52■□□□□ 0.72
Pcdh20Q8BIZ0 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdh20Q8BIZ0 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Pcdh20Q8BIZ0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdh20Q8BIZ0 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pcdh20Q8BIZ0 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pcdh20Q8BIZ0 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdh20Q8BIZ0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Pcdh20Q8BIZ0 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdh20Q8BIZ0 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdh20Q8BIZ0 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdh20Q8BIZ0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Pcdh20Q8BIZ0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.51■□□□□ 0.71
Pcdh20Q8BIZ0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Pcdh20Q8BIZ0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.51■□□□□ 0.71
Pcdh20Q8BIZ0 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Pcdh20Q8BIZ0 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.51■□□□□ 0.71
Pcdh20Q8BIZ0 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Pcdh20Q8BIZ0 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdh20Q8BIZ0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdh20Q8BIZ0 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdh20Q8BIZ0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdh20Q8BIZ0 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdh20Q8BIZ0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdh20Q8BIZ0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdh20Q8BIZ0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdh20Q8BIZ0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdh20Q8BIZ0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdh20Q8BIZ0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdh20Q8BIZ0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdh20Q8BIZ0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdh20Q8BIZ0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdh20Q8BIZ0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdh20Q8BIZ0 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Pcdh20Q8BIZ0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Pcdh20Q8BIZ0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Pcdh20Q8BIZ0 Gm22238-201ENSMUST00000175222 88 ntBASIC19.5■□□□□ 0.71
Pcdh20Q8BIZ0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdh20Q8BIZ0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Pcdh20Q8BIZ0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdh20Q8BIZ0 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdh20Q8BIZ0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdh20Q8BIZ0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdh20Q8BIZ0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdh20Q8BIZ0 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdh20Q8BIZ0 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdh20Q8BIZ0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdh20Q8BIZ0 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.49■□□□□ 0.71
Pcdh20Q8BIZ0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdh20Q8BIZ0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdh20Q8BIZ0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdh20Q8BIZ0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdh20Q8BIZ0 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdh20Q8BIZ0 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Pcdh20Q8BIZ0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdh20Q8BIZ0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdh20Q8BIZ0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdh20Q8BIZ0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdh20Q8BIZ0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.48■□□□□ 0.71
Pcdh20Q8BIZ0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Pcdh20Q8BIZ0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.48■□□□□ 0.71
Pcdh20Q8BIZ0 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdh20Q8BIZ0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdh20Q8BIZ0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.47■□□□□ 0.71
Pcdh20Q8BIZ0 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.47■□□□□ 0.71
Pcdh20Q8BIZ0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdh20Q8BIZ0 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
Pcdh20Q8BIZ0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms