Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smndc1Q8BGT7 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Smndc1Q8BGT7 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smndc1Q8BGT7 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smndc1Q8BGT7 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smndc1Q8BGT7 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Smndc1Q8BGT7 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smndc1Q8BGT7 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smndc1Q8BGT7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smndc1Q8BGT7 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Smndc1Q8BGT7 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Smndc1Q8BGT7 Gm15546-201ENSMUST00000122095 826 ntBASIC19.31■□□□□ 0.68
Smndc1Q8BGT7 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smndc1Q8BGT7 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.31■□□□□ 0.68
Smndc1Q8BGT7 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smndc1Q8BGT7 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smndc1Q8BGT7 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Smndc1Q8BGT7 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.3■□□□□ 0.68
Smndc1Q8BGT7 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smndc1Q8BGT7 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smndc1Q8BGT7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smndc1Q8BGT7 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smndc1Q8BGT7 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.3■□□□□ 0.68
Smndc1Q8BGT7 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smndc1Q8BGT7 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smndc1Q8BGT7 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smndc1Q8BGT7 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smndc1Q8BGT7 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.29■□□□□ 0.68
Smndc1Q8BGT7 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smndc1Q8BGT7 Gm45444-201ENSMUST00000211394 898 ntBASIC19.29■□□□□ 0.68
Smndc1Q8BGT7 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.29■□□□□ 0.68
Smndc1Q8BGT7 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smndc1Q8BGT7 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smndc1Q8BGT7 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Smndc1Q8BGT7 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smndc1Q8BGT7 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smndc1Q8BGT7 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smndc1Q8BGT7 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.28■□□□□ 0.68
Smndc1Q8BGT7 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smndc1Q8BGT7 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smndc1Q8BGT7 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smndc1Q8BGT7 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smndc1Q8BGT7 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Smndc1Q8BGT7 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smndc1Q8BGT7 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smndc1Q8BGT7 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smndc1Q8BGT7 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.27■□□□□ 0.68
Smndc1Q8BGT7 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Smndc1Q8BGT7 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.27■□□□□ 0.68
Smndc1Q8BGT7 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Smndc1Q8BGT7 Gm15820-201ENSMUST00000201566 728 ntBASIC19.27■□□□□ 0.68
Smndc1Q8BGT7 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smndc1Q8BGT7 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smndc1Q8BGT7 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smndc1Q8BGT7 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smndc1Q8BGT7 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Smndc1Q8BGT7 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smndc1Q8BGT7 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smndc1Q8BGT7 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smndc1Q8BGT7 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smndc1Q8BGT7 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smndc1Q8BGT7 Gm13238-201ENSMUST00000117655 780 ntBASIC19.26■□□□□ 0.67
Smndc1Q8BGT7 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.26■□□□□ 0.67
Smndc1Q8BGT7 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.26■□□□□ 0.67
Smndc1Q8BGT7 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.26■□□□□ 0.67
Smndc1Q8BGT7 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smndc1Q8BGT7 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smndc1Q8BGT7 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smndc1Q8BGT7 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.25■□□□□ 0.67
Smndc1Q8BGT7 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smndc1Q8BGT7 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Smndc1Q8BGT7 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smndc1Q8BGT7 Gm43566-201ENSMUST00000196851 808 ntBASIC19.25■□□□□ 0.67
Smndc1Q8BGT7 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smndc1Q8BGT7 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Smndc1Q8BGT7 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smndc1Q8BGT7 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Smndc1Q8BGT7 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smndc1Q8BGT7 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smndc1Q8BGT7 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smndc1Q8BGT7 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smndc1Q8BGT7 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smndc1Q8BGT7 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.24■□□□□ 0.67
Smndc1Q8BGT7 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.24■□□□□ 0.67
Smndc1Q8BGT7 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smndc1Q8BGT7 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smndc1Q8BGT7 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Smndc1Q8BGT7 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smndc1Q8BGT7 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.24■□□□□ 0.67
Smndc1Q8BGT7 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.24■□□□□ 0.67
Smndc1Q8BGT7 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smndc1Q8BGT7 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Smndc1Q8BGT7 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Smndc1Q8BGT7 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smndc1Q8BGT7 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.23■□□□□ 0.67
Smndc1Q8BGT7 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smndc1Q8BGT7 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smndc1Q8BGT7 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smndc1Q8BGT7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Smndc1Q8BGT7 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms