Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim50Q810I2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim50Q810I2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Trim50Q810I2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Trim50Q810I2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Trim50Q810I2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim50Q810I2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.58■□□□□ 0.72
Trim50Q810I2 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim50Q810I2 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim50Q810I2 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim50Q810I2 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim50Q810I2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim50Q810I2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim50Q810I2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Trim50Q810I2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trim50Q810I2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim50Q810I2 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trim50Q810I2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Trim50Q810I2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim50Q810I2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trim50Q810I2 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim50Q810I2 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim50Q810I2 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Trim50Q810I2 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim50Q810I2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim50Q810I2 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Trim50Q810I2 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim50Q810I2 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Trim50Q810I2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim50Q810I2 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim50Q810I2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim50Q810I2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim50Q810I2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim50Q810I2 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim50Q810I2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.56■□□□□ 0.72
Trim50Q810I2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim50Q810I2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim50Q810I2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim50Q810I2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim50Q810I2 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.55■□□□□ 0.72
Trim50Q810I2 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim50Q810I2 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim50Q810I2 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.55■□□□□ 0.72
Trim50Q810I2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim50Q810I2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim50Q810I2 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim50Q810I2 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim50Q810I2 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim50Q810I2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim50Q810I2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim50Q810I2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim50Q810I2 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim50Q810I2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim50Q810I2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim50Q810I2 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim50Q810I2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim50Q810I2 Gm43530-201ENSMUST00000195920 274 ntBASIC19.54■□□□□ 0.72
Trim50Q810I2 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.54■□□□□ 0.72
Trim50Q810I2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Trim50Q810I2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim50Q810I2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim50Q810I2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim50Q810I2 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim50Q810I2 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim50Q810I2 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim50Q810I2 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.53■□□□□ 0.72
Trim50Q810I2 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim50Q810I2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.53■□□□□ 0.72
Trim50Q810I2 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim50Q810I2 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim50Q810I2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim50Q810I2 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim50Q810I2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim50Q810I2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim50Q810I2 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim50Q810I2 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim50Q810I2 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.52■□□□□ 0.72
Trim50Q810I2 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
Trim50Q810I2 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim50Q810I2 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trim50Q810I2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Trim50Q810I2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim50Q810I2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim50Q810I2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim50Q810I2 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.51■□□□□ 0.71
Trim50Q810I2 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Trim50Q810I2 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.51■□□□□ 0.71
Trim50Q810I2 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim50Q810I2 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Trim50Q810I2 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim50Q810I2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim50Q810I2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim50Q810I2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim50Q810I2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim50Q810I2 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim50Q810I2 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim50Q810I2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.49■□□□□ 0.71
Trim50Q810I2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim50Q810I2 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim50Q810I2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms