Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ttc28Q80XJ3 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ttc28Q80XJ3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ttc28Q80XJ3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.12■□□□□ 0.33
Ttc28Q80XJ3 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ttc28Q80XJ3 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ttc28Q80XJ3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ttc28Q80XJ3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ttc28Q80XJ3 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.11■□□□□ 0.33
Ttc28Q80XJ3 Gm13234-201ENSMUST00000120010 747 ntBASIC17.11■□□□□ 0.33
Ttc28Q80XJ3 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ttc28Q80XJ3 Gm7977-201ENSMUST00000193787 748 ntBASIC17.11■□□□□ 0.33
Ttc28Q80XJ3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ttc28Q80XJ3 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ttc28Q80XJ3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ttc28Q80XJ3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ttc28Q80XJ3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ttc28Q80XJ3 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Ttc28Q80XJ3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ttc28Q80XJ3 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ttc28Q80XJ3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ttc28Q80XJ3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Ttc28Q80XJ3 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ttc28Q80XJ3 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.1■□□□□ 0.33
Ttc28Q80XJ3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ttc28Q80XJ3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ttc28Q80XJ3 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ttc28Q80XJ3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ttc28Q80XJ3 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.1■□□□□ 0.33
Ttc28Q80XJ3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ttc28Q80XJ3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ttc28Q80XJ3 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ttc28Q80XJ3 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.09■□□□□ 0.33
Ttc28Q80XJ3 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ttc28Q80XJ3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ttc28Q80XJ3 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.08■□□□□ 0.33
Ttc28Q80XJ3 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.08■□□□□ 0.33
Ttc28Q80XJ3 Gm4968-201ENSMUST00000071458 858 ntBASIC17.08■□□□□ 0.33
Ttc28Q80XJ3 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Ttc28Q80XJ3 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ttc28Q80XJ3 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ttc28Q80XJ3 Gm13148-201ENSMUST00000118892 745 ntBASIC17.08■□□□□ 0.32
Ttc28Q80XJ3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ttc28Q80XJ3 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ttc28Q80XJ3 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.08■□□□□ 0.32
Ttc28Q80XJ3 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ttc28Q80XJ3 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ttc28Q80XJ3 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ttc28Q80XJ3 Gm10653-202ENSMUST00000139570 835 ntBASIC17.07■□□□□ 0.32
Ttc28Q80XJ3 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.07■□□□□ 0.32
Ttc28Q80XJ3 Gm12441-201ENSMUST00000121806 588 ntBASIC17.07■□□□□ 0.32
Ttc28Q80XJ3 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ttc28Q80XJ3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ttc28Q80XJ3 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ttc28Q80XJ3 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.06■□□□□ 0.32
Ttc28Q80XJ3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ttc28Q80XJ3 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Ttc28Q80XJ3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ttc28Q80XJ3 Gm12527-201ENSMUST00000117967 564 ntBASIC17.06■□□□□ 0.32
Ttc28Q80XJ3 Gm10252-201ENSMUST00000209541 832 ntBASIC17.06■□□□□ 0.32
Ttc28Q80XJ3 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ttc28Q80XJ3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.06■□□□□ 0.32
Ttc28Q80XJ3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ttc28Q80XJ3 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ttc28Q80XJ3 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ttc28Q80XJ3 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ttc28Q80XJ3 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ttc28Q80XJ3 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ttc28Q80XJ3 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ttc28Q80XJ3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ttc28Q80XJ3 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ttc28Q80XJ3 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ttc28Q80XJ3 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ttc28Q80XJ3 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.04■□□□□ 0.32
Ttc28Q80XJ3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ttc28Q80XJ3 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.04■□□□□ 0.32
Ttc28Q80XJ3 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ttc28Q80XJ3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.04■□□□□ 0.32
Ttc28Q80XJ3 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Ttc28Q80XJ3 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ttc28Q80XJ3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ttc28Q80XJ3 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ttc28Q80XJ3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Ttc28Q80XJ3 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ttc28Q80XJ3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.03■□□□□ 0.32
Ttc28Q80XJ3 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ttc28Q80XJ3 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.03■□□□□ 0.32
Ttc28Q80XJ3 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.03■□□□□ 0.32
Ttc28Q80XJ3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.03■□□□□ 0.32
Ttc28Q80XJ3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.03■□□□□ 0.32
Ttc28Q80XJ3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ttc28Q80XJ3 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ttc28Q80XJ3 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.02■□□□□ 0.32
Ttc28Q80XJ3 Gm22240-201ENSMUST00000175225 82 ntBASIC17.02■□□□□ 0.32
Ttc28Q80XJ3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ttc28Q80XJ3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ttc28Q80XJ3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ttc28Q80XJ3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.02■□□□□ 0.31
Ttc28Q80XJ3 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.02■□□□□ 0.31
Ttc28Q80XJ3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms