Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim36Q80WG7 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.32■□□□□ 0.68
Trim36Q80WG7 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Trim36Q80WG7 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim36Q80WG7 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim36Q80WG7 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim36Q80WG7 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim36Q80WG7 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim36Q80WG7 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim36Q80WG7 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim36Q80WG7 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim36Q80WG7 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim36Q80WG7 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.31■□□□□ 0.68
Trim36Q80WG7 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.31■□□□□ 0.68
Trim36Q80WG7 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.31■□□□□ 0.68
Trim36Q80WG7 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim36Q80WG7 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim36Q80WG7 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim36Q80WG7 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim36Q80WG7 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.3■□□□□ 0.68
Trim36Q80WG7 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim36Q80WG7 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim36Q80WG7 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim36Q80WG7 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim36Q80WG7 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Trim36Q80WG7 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim36Q80WG7 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim36Q80WG7 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim36Q80WG7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim36Q80WG7 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim36Q80WG7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim36Q80WG7 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim36Q80WG7 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim36Q80WG7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim36Q80WG7 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.29■□□□□ 0.68
Trim36Q80WG7 Gm7417-201ENSMUST00000192950 473 ntBASIC19.29■□□□□ 0.68
Trim36Q80WG7 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.29■□□□□ 0.68
Trim36Q80WG7 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Trim36Q80WG7 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim36Q80WG7 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Trim36Q80WG7 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim36Q80WG7 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim36Q80WG7 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.28■□□□□ 0.68
Trim36Q80WG7 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.28■□□□□ 0.68
Trim36Q80WG7 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim36Q80WG7 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim36Q80WG7 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.28■□□□□ 0.68
Trim36Q80WG7 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.28■□□□□ 0.68
Trim36Q80WG7 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim36Q80WG7 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim36Q80WG7 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim36Q80WG7 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim36Q80WG7 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim36Q80WG7 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim36Q80WG7 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim36Q80WG7 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Trim36Q80WG7 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim36Q80WG7 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim36Q80WG7 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim36Q80WG7 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim36Q80WG7 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim36Q80WG7 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.26■□□□□ 0.67
Trim36Q80WG7 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim36Q80WG7 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim36Q80WG7 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim36Q80WG7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Trim36Q80WG7 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.26■□□□□ 0.67
Trim36Q80WG7 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.26■□□□□ 0.67
Trim36Q80WG7 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.26■□□□□ 0.67
Trim36Q80WG7 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.26■□□□□ 0.67
Trim36Q80WG7 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.26■□□□□ 0.67
Trim36Q80WG7 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim36Q80WG7 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Trim36Q80WG7 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim36Q80WG7 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim36Q80WG7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim36Q80WG7 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim36Q80WG7 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trim36Q80WG7 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.25■□□□□ 0.67
Trim36Q80WG7 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim36Q80WG7 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.25■□□□□ 0.67
Trim36Q80WG7 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Trim36Q80WG7 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim36Q80WG7 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim36Q80WG7 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim36Q80WG7 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim36Q80WG7 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim36Q80WG7 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Trim36Q80WG7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim36Q80WG7 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim36Q80WG7 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.24■□□□□ 0.67
Trim36Q80WG7 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim36Q80WG7 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim36Q80WG7 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Trim36Q80WG7 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim36Q80WG7 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim36Q80WG7 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim36Q80WG7 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trim36Q80WG7 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim36Q80WG7 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms