Protein–RNA interactions for Protein: Q80U56

Avl9, Late secretory pathway protein AVL9 homolog, mousemouse

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Avl9Q80U56 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Avl9Q80U56 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
Avl9Q80U56 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Avl9Q80U56 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Avl9Q80U56 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.46■□□□□ 0.71
Avl9Q80U56 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Avl9Q80U56 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Avl9Q80U56 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Avl9Q80U56 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Avl9Q80U56 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Avl9Q80U56 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.45■□□□□ 0.7
Avl9Q80U56 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Avl9Q80U56 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Avl9Q80U56 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Avl9Q80U56 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Avl9Q80U56 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Avl9Q80U56 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Avl9Q80U56 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Avl9Q80U56 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Avl9Q80U56 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Avl9Q80U56 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Avl9Q80U56 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Avl9Q80U56 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Avl9Q80U56 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Avl9Q80U56 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.43■□□□□ 0.7
Avl9Q80U56 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Avl9Q80U56 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Avl9Q80U56 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Avl9Q80U56 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Avl9Q80U56 Gm43017-201ENSMUST00000198296 752 ntBASIC19.43■□□□□ 0.7
Avl9Q80U56 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Avl9Q80U56 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Avl9Q80U56 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Avl9Q80U56 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Avl9Q80U56 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Avl9Q80U56 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Avl9Q80U56 Spcs1-204ENSMUST00000226782 949 ntBASIC19.42■□□□□ 0.7
Avl9Q80U56 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Avl9Q80U56 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Avl9Q80U56 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.42■□□□□ 0.7
Avl9Q80U56 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Avl9Q80U56 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Avl9Q80U56 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Avl9Q80U56 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Avl9Q80U56 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Avl9Q80U56 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Avl9Q80U56 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Avl9Q80U56 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.41■□□□□ 0.7
Avl9Q80U56 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.41■□□□□ 0.7
Avl9Q80U56 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Avl9Q80U56 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Avl9Q80U56 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Avl9Q80U56 Mir6236-201ENSMUST00000184437 123 ntBASIC19.41■□□□□ 0.7
Avl9Q80U56 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Avl9Q80U56 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.41■□□□□ 0.7
Avl9Q80U56 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.41■□□□□ 0.7
Avl9Q80U56 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Avl9Q80U56 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.41■□□□□ 0.7
Avl9Q80U56 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Avl9Q80U56 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Avl9Q80U56 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Avl9Q80U56 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Avl9Q80U56 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Avl9Q80U56 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Avl9Q80U56 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Avl9Q80U56 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Avl9Q80U56 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Avl9Q80U56 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Avl9Q80U56 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Avl9Q80U56 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Avl9Q80U56 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.39■□□□□ 0.69
Avl9Q80U56 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Avl9Q80U56 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Avl9Q80U56 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Avl9Q80U56 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Avl9Q80U56 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Avl9Q80U56 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Avl9Q80U56 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Avl9Q80U56 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.38■□□□□ 0.69
Avl9Q80U56 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Avl9Q80U56 Gm43173-201ENSMUST00000202246 593 ntBASIC19.38■□□□□ 0.69
Avl9Q80U56 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.38■□□□□ 0.69
Avl9Q80U56 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Avl9Q80U56 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Avl9Q80U56 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Avl9Q80U56 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Avl9Q80U56 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Avl9Q80U56 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Avl9Q80U56 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Avl9Q80U56 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Avl9Q80U56 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Avl9Q80U56 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Avl9Q80U56 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Avl9Q80U56 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.37■□□□□ 0.69
Avl9Q80U56 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Avl9Q80U56 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Avl9Q80U56 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Avl9Q80U56 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Avl9Q80U56 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Avl9Q80U56 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms