Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Rfx4Q7TNK1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx4Q7TNK1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx4Q7TNK1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Rfx4Q7TNK1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfx4Q7TNK1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.26■□□□□ 0.67
Rfx4Q7TNK1 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx4Q7TNK1 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx4Q7TNK1 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.25■□□□□ 0.67
Rfx4Q7TNK1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx4Q7TNK1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx4Q7TNK1 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx4Q7TNK1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx4Q7TNK1 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Rfx4Q7TNK1 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfx4Q7TNK1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfx4Q7TNK1 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Rfx4Q7TNK1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfx4Q7TNK1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Rfx4Q7TNK1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfx4Q7TNK1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfx4Q7TNK1 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.24■□□□□ 0.67
Rfx4Q7TNK1 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfx4Q7TNK1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx4Q7TNK1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx4Q7TNK1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx4Q7TNK1 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Rfx4Q7TNK1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx4Q7TNK1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx4Q7TNK1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx4Q7TNK1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx4Q7TNK1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfx4Q7TNK1 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx4Q7TNK1 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Rfx4Q7TNK1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.22■□□□□ 0.67
Rfx4Q7TNK1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx4Q7TNK1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Rfx4Q7TNK1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx4Q7TNK1 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx4Q7TNK1 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.22■□□□□ 0.67
Rfx4Q7TNK1 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.22■□□□□ 0.67
Rfx4Q7TNK1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.22■□□□□ 0.67
Rfx4Q7TNK1 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfx4Q7TNK1 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx4Q7TNK1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx4Q7TNK1 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx4Q7TNK1 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx4Q7TNK1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx4Q7TNK1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx4Q7TNK1 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx4Q7TNK1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.21■□□□□ 0.67
Rfx4Q7TNK1 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx4Q7TNK1 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx4Q7TNK1 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx4Q7TNK1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx4Q7TNK1 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx4Q7TNK1 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx4Q7TNK1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Rfx4Q7TNK1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.2■□□□□ 0.66
Rfx4Q7TNK1 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.2■□□□□ 0.66
Rfx4Q7TNK1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx4Q7TNK1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Rfx4Q7TNK1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx4Q7TNK1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.2■□□□□ 0.66
Rfx4Q7TNK1 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx4Q7TNK1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx4Q7TNK1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx4Q7TNK1 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx4Q7TNK1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx4Q7TNK1 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx4Q7TNK1 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Rfx4Q7TNK1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.19■□□□□ 0.66
Rfx4Q7TNK1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.19■□□□□ 0.66
Rfx4Q7TNK1 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx4Q7TNK1 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Rfx4Q7TNK1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx4Q7TNK1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Rfx4Q7TNK1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx4Q7TNK1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx4Q7TNK1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx4Q7TNK1 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx4Q7TNK1 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Rfx4Q7TNK1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx4Q7TNK1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx4Q7TNK1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx4Q7TNK1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx4Q7TNK1 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.18■□□□□ 0.66
Rfx4Q7TNK1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfx4Q7TNK1 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfx4Q7TNK1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfx4Q7TNK1 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfx4Q7TNK1 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.17■□□□□ 0.66
Rfx4Q7TNK1 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.17■□□□□ 0.66
Rfx4Q7TNK1 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.17■□□□□ 0.66
Rfx4Q7TNK1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfx4Q7TNK1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rfx4Q7TNK1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfx4Q7TNK1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Rfx4Q7TNK1 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfx4Q7TNK1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms