Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vma21Q78T54 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.37■□□□□ 0.21
Vma21Q78T54 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.37■□□□□ 0.21
Vma21Q78T54 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Vma21Q78T54 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Vma21Q78T54 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vma21Q78T54 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Vma21Q78T54 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vma21Q78T54 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vma21Q78T54 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vma21Q78T54 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vma21Q78T54 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vma21Q78T54 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vma21Q78T54 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vma21Q78T54 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Vma21Q78T54 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vma21Q78T54 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.36■□□□□ 0.21
Vma21Q78T54 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Vma21Q78T54 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.36■□□□□ 0.21
Vma21Q78T54 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Vma21Q78T54 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vma21Q78T54 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vma21Q78T54 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vma21Q78T54 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vma21Q78T54 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vma21Q78T54 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vma21Q78T54 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vma21Q78T54 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Vma21Q78T54 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Vma21Q78T54 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Vma21Q78T54 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vma21Q78T54 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vma21Q78T54 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vma21Q78T54 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vma21Q78T54 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Vma21Q78T54 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Vma21Q78T54 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Vma21Q78T54 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vma21Q78T54 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vma21Q78T54 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Vma21Q78T54 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Vma21Q78T54 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.34■□□□□ 0.21
Vma21Q78T54 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vma21Q78T54 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vma21Q78T54 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Vma21Q78T54 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vma21Q78T54 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vma21Q78T54 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Vma21Q78T54 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.21
Vma21Q78T54 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Vma21Q78T54 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Vma21Q78T54 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vma21Q78T54 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16.33■□□□□ 0.2
Vma21Q78T54 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vma21Q78T54 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vma21Q78T54 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Vma21Q78T54 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vma21Q78T54 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vma21Q78T54 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vma21Q78T54 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Vma21Q78T54 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.33■□□□□ 0.2
Vma21Q78T54 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vma21Q78T54 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Vma21Q78T54 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vma21Q78T54 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vma21Q78T54 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vma21Q78T54 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vma21Q78T54 Cap2-205ENSMUST00000225824 1634 ntBASIC16.32■□□□□ 0.2
Vma21Q78T54 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vma21Q78T54 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vma21Q78T54 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vma21Q78T54 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vma21Q78T54 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vma21Q78T54 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.31■□□□□ 0.2
Vma21Q78T54 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vma21Q78T54 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vma21Q78T54 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.31■□□□□ 0.2
Vma21Q78T54 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vma21Q78T54 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vma21Q78T54 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.31■□□□□ 0.2
Vma21Q78T54 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.31■□□□□ 0.2
Vma21Q78T54 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.31■□□□□ 0.2
Vma21Q78T54 Gm10399-202ENSMUST00000202768 748 ntBASIC16.31■□□□□ 0.2
Vma21Q78T54 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vma21Q78T54 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Vma21Q78T54 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vma21Q78T54 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vma21Q78T54 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Vma21Q78T54 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vma21Q78T54 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Vma21Q78T54 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Vma21Q78T54 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.3■□□□□ 0.2
Vma21Q78T54 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vma21Q78T54 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vma21Q78T54 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vma21Q78T54 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.3■□□□□ 0.2
Vma21Q78T54 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.3■□□□□ 0.2
Vma21Q78T54 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vma21Q78T54 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Vma21Q78T54 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms