Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.3■□□□□ 0.84
Casc4Q6P2L7 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Casc4Q6P2L7 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Casc4Q6P2L7 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Casc4Q6P2L7 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Casc4Q6P2L7 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Casc4Q6P2L7 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.3■□□□□ 0.84
Casc4Q6P2L7 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Casc4Q6P2L7 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Casc4Q6P2L7 Gm13241-201ENSMUST00000094493 780 ntBASIC20.3■□□□□ 0.84
Casc4Q6P2L7 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Casc4Q6P2L7 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Casc4Q6P2L7 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Casc4Q6P2L7 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.29■□□□□ 0.84
Casc4Q6P2L7 Golgb1-201ENSMUST00000023534 498 ntBASIC20.29■□□□□ 0.84
Casc4Q6P2L7 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Casc4Q6P2L7 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Casc4Q6P2L7 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.29■□□□□ 0.84
Casc4Q6P2L7 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Casc4Q6P2L7 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Casc4Q6P2L7 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Casc4Q6P2L7 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Casc4Q6P2L7 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Casc4Q6P2L7 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Casc4Q6P2L7 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Casc4Q6P2L7 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Casc4Q6P2L7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Casc4Q6P2L7 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Casc4Q6P2L7 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Casc4Q6P2L7 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Casc4Q6P2L7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Casc4Q6P2L7 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Casc4Q6P2L7 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Casc4Q6P2L7 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Casc4Q6P2L7 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Casc4Q6P2L7 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Casc4Q6P2L7 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Casc4Q6P2L7 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.27■□□□□ 0.83
Casc4Q6P2L7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Casc4Q6P2L7 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Casc4Q6P2L7 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.26■□□□□ 0.83
Casc4Q6P2L7 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Casc4Q6P2L7 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.26■□□□□ 0.83
Casc4Q6P2L7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Casc4Q6P2L7 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Casc4Q6P2L7 Notumos-201ENSMUST00000151998 2659 ntBASIC20.26■□□□□ 0.83
Casc4Q6P2L7 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
Casc4Q6P2L7 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Casc4Q6P2L7 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Casc4Q6P2L7 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Casc4Q6P2L7 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Casc4Q6P2L7 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
Casc4Q6P2L7 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Casc4Q6P2L7 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Casc4Q6P2L7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Casc4Q6P2L7 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Casc4Q6P2L7 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.24■□□□□ 0.83
Casc4Q6P2L7 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Casc4Q6P2L7 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.24■□□□□ 0.83
Casc4Q6P2L7 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Casc4Q6P2L7 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Casc4Q6P2L7 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Casc4Q6P2L7 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Casc4Q6P2L7 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.23■□□□□ 0.83
Casc4Q6P2L7 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.23■□□□□ 0.83
Casc4Q6P2L7 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Casc4Q6P2L7 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Casc4Q6P2L7 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Casc4Q6P2L7 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Casc4Q6P2L7 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Casc4Q6P2L7 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Casc4Q6P2L7 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Casc4Q6P2L7 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Casc4Q6P2L7 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Casc4Q6P2L7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Casc4Q6P2L7 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Casc4Q6P2L7 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Casc4Q6P2L7 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.21■□□□□ 0.83
Casc4Q6P2L7 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Casc4Q6P2L7 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Casc4Q6P2L7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Casc4Q6P2L7 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Casc4Q6P2L7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Casc4Q6P2L7 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Casc4Q6P2L7 Gm21956-201ENSMUST00000179946 522 ntBASIC20.21■□□□□ 0.83
Casc4Q6P2L7 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.21■□□□□ 0.83
Casc4Q6P2L7 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Casc4Q6P2L7 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Casc4Q6P2L7 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Casc4Q6P2L7 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Casc4Q6P2L7 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Casc4Q6P2L7 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Casc4Q6P2L7 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Casc4Q6P2L7 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Casc4Q6P2L7 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Casc4Q6P2L7 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Casc4Q6P2L7 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Casc4Q6P2L7 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.2■□□□□ 0.82
Casc4Q6P2L7 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Casc4Q6P2L7 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms