Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC31.72■■■□□ 2.67
Slx4Q6P1D7 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Slx4Q6P1D7 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Slx4Q6P1D7 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Slx4Q6P1D7 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Slx4Q6P1D7 AC164883.3-201ENSMUST00000227396 1774 ntBASIC31.71■■■□□ 2.67
Slx4Q6P1D7 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC31.71■■■□□ 2.67
Slx4Q6P1D7 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Slx4Q6P1D7 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Slx4Q6P1D7 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC31.71■■■□□ 2.67
Slx4Q6P1D7 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC31.71■■■□□ 2.67
Slx4Q6P1D7 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Slx4Q6P1D7 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC31.7■■■□□ 2.67
Slx4Q6P1D7 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
Slx4Q6P1D7 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
Slx4Q6P1D7 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC31.69■■■□□ 2.66
Slx4Q6P1D7 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Slx4Q6P1D7 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Slx4Q6P1D7 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC31.69■■■□□ 2.66
Slx4Q6P1D7 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC31.68■■■□□ 2.66
Slx4Q6P1D7 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC31.68■■■□□ 2.66
Slx4Q6P1D7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC31.68■■■□□ 2.66
Slx4Q6P1D7 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Slx4Q6P1D7 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC31.68■■■□□ 2.66
Slx4Q6P1D7 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC31.68■■■□□ 2.66
Slx4Q6P1D7 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Slx4Q6P1D7 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Slx4Q6P1D7 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Slx4Q6P1D7 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC31.67■■■□□ 2.66
Slx4Q6P1D7 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Slx4Q6P1D7 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC31.67■■■□□ 2.66
Slx4Q6P1D7 Gm13234-201ENSMUST00000120010 747 ntBASIC31.67■■■□□ 2.66
Slx4Q6P1D7 Ap3s1-204ENSMUST00000225520 957 ntBASIC31.67■■■□□ 2.66
Slx4Q6P1D7 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Slx4Q6P1D7 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Slx4Q6P1D7 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
Slx4Q6P1D7 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Slx4Q6P1D7 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
Slx4Q6P1D7 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
Slx4Q6P1D7 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
Slx4Q6P1D7 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Slx4Q6P1D7 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC31.65■■■□□ 2.66
Slx4Q6P1D7 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC31.65■■■□□ 2.66
Slx4Q6P1D7 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Slx4Q6P1D7 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC31.64■■■□□ 2.66
Slx4Q6P1D7 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Slx4Q6P1D7 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Slx4Q6P1D7 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Slx4Q6P1D7 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC31.64■■■□□ 2.66
Slx4Q6P1D7 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC31.64■■■□□ 2.65
Slx4Q6P1D7 Gm12441-201ENSMUST00000121806 588 ntBASIC31.64■■■□□ 2.65
Slx4Q6P1D7 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC31.64■■■□□ 2.65
Slx4Q6P1D7 Gm37415-201ENSMUST00000192265 2054 ntBASIC31.64■■■□□ 2.65
Slx4Q6P1D7 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Slx4Q6P1D7 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Slx4Q6P1D7 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Slx4Q6P1D7 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
Slx4Q6P1D7 Reep4-203ENSMUST00000226563 1444 ntBASIC31.62■■■□□ 2.65
Slx4Q6P1D7 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC31.62■■■□□ 2.65
Slx4Q6P1D7 Gm44949-201ENSMUST00000206423 1450 ntBASIC31.62■■■□□ 2.65
Slx4Q6P1D7 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Slx4Q6P1D7 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
Slx4Q6P1D7 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Slx4Q6P1D7 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC31.61■■■□□ 2.65
Slx4Q6P1D7 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Slx4Q6P1D7 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Slx4Q6P1D7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
Slx4Q6P1D7 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC31.6■■■□□ 2.65
Slx4Q6P1D7 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC31.6■■■□□ 2.65
Slx4Q6P1D7 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
Slx4Q6P1D7 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Slx4Q6P1D7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
Slx4Q6P1D7 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC31.6■■■□□ 2.65
Slx4Q6P1D7 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Slx4Q6P1D7 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC31.59■■■□□ 2.65
Slx4Q6P1D7 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
Slx4Q6P1D7 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Slx4Q6P1D7 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Slx4Q6P1D7 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Slx4Q6P1D7 AC137127.1-201ENSMUST00000213466 1078 ntBASIC31.58■■■□□ 2.65
Slx4Q6P1D7 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC31.57■■■□□ 2.65
Slx4Q6P1D7 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Slx4Q6P1D7 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Slx4Q6P1D7 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Slx4Q6P1D7 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC31.57■■■□□ 2.64
Slx4Q6P1D7 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC31.57■■■□□ 2.64
Slx4Q6P1D7 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Slx4Q6P1D7 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Slx4Q6P1D7 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Slx4Q6P1D7 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Slx4Q6P1D7 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC31.56■■■□□ 2.64
Slx4Q6P1D7 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC31.56■■■□□ 2.64
Slx4Q6P1D7 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Slx4Q6P1D7 Gm43403-201ENSMUST00000198011 1786 ntBASIC31.56■■■□□ 2.64
Slx4Q6P1D7 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC31.56■■■□□ 2.64
Slx4Q6P1D7 Gm9988-201ENSMUST00000069786 435 ntBASIC31.56■■■□□ 2.64
Slx4Q6P1D7 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Slx4Q6P1D7 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Slx4Q6P1D7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC31.55■■■□□ 2.64
Slx4Q6P1D7 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC31.54■■■□□ 2.64
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms