Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sp140Q6NSQ5 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Sp140Q6NSQ5 Gm7417-201ENSMUST00000192950 473 ntBASIC20.45■□□□□ 0.86
Sp140Q6NSQ5 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sp140Q6NSQ5 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Sp140Q6NSQ5 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sp140Q6NSQ5 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sp140Q6NSQ5 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sp140Q6NSQ5 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sp140Q6NSQ5 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sp140Q6NSQ5 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.44■□□□□ 0.86
Sp140Q6NSQ5 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sp140Q6NSQ5 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sp140Q6NSQ5 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Sp140Q6NSQ5 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sp140Q6NSQ5 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sp140Q6NSQ5 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Sp140Q6NSQ5 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sp140Q6NSQ5 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sp140Q6NSQ5 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sp140Q6NSQ5 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sp140Q6NSQ5 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sp140Q6NSQ5 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sp140Q6NSQ5 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.41■□□□□ 0.86
Sp140Q6NSQ5 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.41■□□□□ 0.86
Sp140Q6NSQ5 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sp140Q6NSQ5 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sp140Q6NSQ5 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Sp140Q6NSQ5 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Sp140Q6NSQ5 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sp140Q6NSQ5 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Sp140Q6NSQ5 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sp140Q6NSQ5 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sp140Q6NSQ5 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Sp140Q6NSQ5 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sp140Q6NSQ5 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.4■□□□□ 0.86
Sp140Q6NSQ5 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sp140Q6NSQ5 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sp140Q6NSQ5 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sp140Q6NSQ5 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.4■□□□□ 0.86
Sp140Q6NSQ5 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.4■□□□□ 0.86
Sp140Q6NSQ5 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.4■□□□□ 0.86
Sp140Q6NSQ5 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.4■□□□□ 0.86
Sp140Q6NSQ5 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sp140Q6NSQ5 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
Sp140Q6NSQ5 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sp140Q6NSQ5 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Sp140Q6NSQ5 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Sp140Q6NSQ5 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Sp140Q6NSQ5 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Sp140Q6NSQ5 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Sp140Q6NSQ5 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.39■□□□□ 0.85
Sp140Q6NSQ5 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.39■□□□□ 0.85
Sp140Q6NSQ5 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sp140Q6NSQ5 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sp140Q6NSQ5 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Sp140Q6NSQ5 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sp140Q6NSQ5 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sp140Q6NSQ5 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sp140Q6NSQ5 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sp140Q6NSQ5 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sp140Q6NSQ5 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sp140Q6NSQ5 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sp140Q6NSQ5 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sp140Q6NSQ5 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sp140Q6NSQ5 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Sp140Q6NSQ5 Gm9870-201ENSMUST00000063874 645 ntBASIC20.38■□□□□ 0.85
Sp140Q6NSQ5 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sp140Q6NSQ5 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Sp140Q6NSQ5 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sp140Q6NSQ5 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sp140Q6NSQ5 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sp140Q6NSQ5 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sp140Q6NSQ5 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sp140Q6NSQ5 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sp140Q6NSQ5 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.37■□□□□ 0.85
Sp140Q6NSQ5 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sp140Q6NSQ5 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sp140Q6NSQ5 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Sp140Q6NSQ5 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sp140Q6NSQ5 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
Sp140Q6NSQ5 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sp140Q6NSQ5 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sp140Q6NSQ5 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sp140Q6NSQ5 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.36■□□□□ 0.85
Sp140Q6NSQ5 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sp140Q6NSQ5 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sp140Q6NSQ5 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.36■□□□□ 0.85
Sp140Q6NSQ5 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sp140Q6NSQ5 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Sp140Q6NSQ5 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sp140Q6NSQ5 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sp140Q6NSQ5 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sp140Q6NSQ5 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sp140Q6NSQ5 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sp140Q6NSQ5 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sp140Q6NSQ5 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sp140Q6NSQ5 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.35■□□□□ 0.85
Sp140Q6NSQ5 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.35■□□□□ 0.85
Sp140Q6NSQ5 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms