Protein–RNA interactions for Protein: Q64287

Irf4, Interferon regulatory factor 4, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf4Q64287 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Irf4Q64287 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Irf4Q64287 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Irf4Q64287 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.8■□□□□ 0.76
Irf4Q64287 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.8■□□□□ 0.76
Irf4Q64287 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Irf4Q64287 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Irf4Q64287 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Irf4Q64287 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Irf4Q64287 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Irf4Q64287 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Irf4Q64287 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Irf4Q64287 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Irf4Q64287 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Irf4Q64287 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Irf4Q64287 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Irf4Q64287 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Irf4Q64287 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Irf4Q64287 Gm43173-201ENSMUST00000202246 593 ntBASIC19.79■□□□□ 0.76
Irf4Q64287 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Irf4Q64287 Spcs1-204ENSMUST00000226782 949 ntBASIC19.79■□□□□ 0.76
Irf4Q64287 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Irf4Q64287 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Irf4Q64287 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
Irf4Q64287 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Irf4Q64287 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Irf4Q64287 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Irf4Q64287 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.78■□□□□ 0.76
Irf4Q64287 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.78■□□□□ 0.76
Irf4Q64287 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Irf4Q64287 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Irf4Q64287 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Irf4Q64287 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Irf4Q64287 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Irf4Q64287 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Irf4Q64287 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.77■□□□□ 0.76
Irf4Q64287 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Irf4Q64287 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Irf4Q64287 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
Irf4Q64287 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Irf4Q64287 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Irf4Q64287 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Irf4Q64287 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Irf4Q64287 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Irf4Q64287 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Irf4Q64287 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Irf4Q64287 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Irf4Q64287 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Irf4Q64287 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Irf4Q64287 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
Irf4Q64287 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Irf4Q64287 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.76■□□□□ 0.75
Irf4Q64287 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Irf4Q64287 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Irf4Q64287 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Irf4Q64287 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Irf4Q64287 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Irf4Q64287 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Irf4Q64287 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Irf4Q64287 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.75■□□□□ 0.75
Irf4Q64287 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Irf4Q64287 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Irf4Q64287 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Irf4Q64287 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.75■□□□□ 0.75
Irf4Q64287 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Irf4Q64287 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Irf4Q64287 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Irf4Q64287 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Irf4Q64287 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Irf4Q64287 Mir6236-201ENSMUST00000184437 123 ntBASIC19.74■□□□□ 0.75
Irf4Q64287 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Irf4Q64287 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Irf4Q64287 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Irf4Q64287 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Irf4Q64287 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.73■□□□□ 0.75
Irf4Q64287 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Irf4Q64287 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
Irf4Q64287 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Irf4Q64287 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Irf4Q64287 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.73■□□□□ 0.75
Irf4Q64287 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.73■□□□□ 0.75
Irf4Q64287 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Irf4Q64287 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Irf4Q64287 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Irf4Q64287 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Irf4Q64287 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.72■□□□□ 0.75
Irf4Q64287 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.72■□□□□ 0.75
Irf4Q64287 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Irf4Q64287 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Irf4Q64287 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.72■□□□□ 0.75
Irf4Q64287 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Irf4Q64287 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Irf4Q64287 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Irf4Q64287 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Irf4Q64287 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Irf4Q64287 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Irf4Q64287 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Irf4Q64287 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.71■□□□□ 0.75
Irf4Q64287 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Irf4Q64287 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms