Protein–RNA interactions for Protein: Q62193

Rpa2, Replication protein A 32 kDa subunit, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa2Q62193 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rpa2Q62193 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Rpa2Q62193 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rpa2Q62193 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rpa2Q62193 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Rpa2Q62193 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Rpa2Q62193 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.42■□□□□ 0.54
Rpa2Q62193 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rpa2Q62193 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rpa2Q62193 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rpa2Q62193 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.42■□□□□ 0.54
Rpa2Q62193 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.42■□□□□ 0.54
Rpa2Q62193 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Rpa2Q62193 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.42■□□□□ 0.54
Rpa2Q62193 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rpa2Q62193 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rpa2Q62193 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rpa2Q62193 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rpa2Q62193 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Rpa2Q62193 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpa2Q62193 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rpa2Q62193 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Rpa2Q62193 Golgb1-201ENSMUST00000023534 498 ntBASIC18.41■□□□□ 0.54
Rpa2Q62193 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpa2Q62193 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpa2Q62193 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.41■□□□□ 0.54
Rpa2Q62193 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Rpa2Q62193 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.4■□□□□ 0.54
Rpa2Q62193 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpa2Q62193 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpa2Q62193 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpa2Q62193 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rpa2Q62193 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpa2Q62193 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rpa2Q62193 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpa2Q62193 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.4■□□□□ 0.54
Rpa2Q62193 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rpa2Q62193 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Rpa2Q62193 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.39■□□□□ 0.54
Rpa2Q62193 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rpa2Q62193 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rpa2Q62193 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpa2Q62193 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpa2Q62193 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpa2Q62193 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpa2Q62193 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.38■□□□□ 0.53
Rpa2Q62193 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpa2Q62193 Gm12922-201ENSMUST00000120626 809 ntBASIC18.38■□□□□ 0.53
Rpa2Q62193 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rpa2Q62193 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.38■□□□□ 0.53
Rpa2Q62193 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpa2Q62193 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rpa2Q62193 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpa2Q62193 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpa2Q62193 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpa2Q62193 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Rpa2Q62193 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rpa2Q62193 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpa2Q62193 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpa2Q62193 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.37■□□□□ 0.53
Rpa2Q62193 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpa2Q62193 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Rpa2Q62193 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Rpa2Q62193 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpa2Q62193 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rpa2Q62193 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpa2Q62193 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpa2Q62193 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpa2Q62193 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpa2Q62193 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpa2Q62193 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rpa2Q62193 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.36■□□□□ 0.53
Rpa2Q62193 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Rpa2Q62193 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.36■□□□□ 0.53
Rpa2Q62193 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpa2Q62193 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpa2Q62193 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpa2Q62193 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpa2Q62193 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Rpa2Q62193 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.35■□□□□ 0.53
Rpa2Q62193 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Rpa2Q62193 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpa2Q62193 Gm43530-201ENSMUST00000195920 274 ntBASIC18.35■□□□□ 0.53
Rpa2Q62193 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.35■□□□□ 0.53
Rpa2Q62193 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpa2Q62193 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Rpa2Q62193 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpa2Q62193 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpa2Q62193 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpa2Q62193 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.34■□□□□ 0.53
Rpa2Q62193 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpa2Q62193 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.34■□□□□ 0.53
Rpa2Q62193 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.34■□□□□ 0.53
Rpa2Q62193 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpa2Q62193 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpa2Q62193 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpa2Q62193 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpa2Q62193 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rpa2Q62193 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rpa2Q62193 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms