Protein–RNA interactions for Protein: Q61496

Ddx4, ATP-dependent RNA helicase DDX4, mousemouse

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx4Q61496 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Ddx4Q61496 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Ddx4Q61496 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Ddx4Q61496 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Ddx4Q61496 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC22.32■■□□□ 1.16
Ddx4Q61496 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ddx4Q61496 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Ddx4Q61496 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ddx4Q61496 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Ddx4Q61496 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ddx4Q61496 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ddx4Q61496 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Ddx4Q61496 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Ddx4Q61496 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ddx4Q61496 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Ddx4Q61496 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ddx4Q61496 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx4Q61496 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx4Q61496 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC22.3■■□□□ 1.16
Ddx4Q61496 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC22.3■■□□□ 1.16
Ddx4Q61496 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC22.3■■□□□ 1.16
Ddx4Q61496 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC22.3■■□□□ 1.16
Ddx4Q61496 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx4Q61496 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC22.3■■□□□ 1.16
Ddx4Q61496 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC22.29■■□□□ 1.16
Ddx4Q61496 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC22.29■■□□□ 1.16
Ddx4Q61496 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ddx4Q61496 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Ddx4Q61496 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ddx4Q61496 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Ddx4Q61496 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ddx4Q61496 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ddx4Q61496 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx4Q61496 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx4Q61496 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx4Q61496 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx4Q61496 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx4Q61496 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx4Q61496 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx4Q61496 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx4Q61496 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx4Q61496 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx4Q61496 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Ddx4Q61496 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC22.27■■□□□ 1.16
Ddx4Q61496 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC22.27■■□□□ 1.16
Ddx4Q61496 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Ddx4Q61496 Gm43403-201ENSMUST00000198011 1786 ntBASIC22.27■■□□□ 1.16
Ddx4Q61496 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ddx4Q61496 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ddx4Q61496 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Ddx4Q61496 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ddx4Q61496 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC22.26■■□□□ 1.15
Ddx4Q61496 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ddx4Q61496 Gm44949-201ENSMUST00000206423 1450 ntBASIC22.26■■□□□ 1.15
Ddx4Q61496 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ddx4Q61496 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ddx4Q61496 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Ddx4Q61496 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ddx4Q61496 Gm13234-201ENSMUST00000120010 747 ntBASIC22.25■■□□□ 1.15
Ddx4Q61496 Gm14281-201ENSMUST00000121700 1294 ntBASIC22.25■■□□□ 1.15
Ddx4Q61496 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Ddx4Q61496 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC22.25■■□□□ 1.15
Ddx4Q61496 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC22.25■■□□□ 1.15
Ddx4Q61496 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ddx4Q61496 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ddx4Q61496 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ddx4Q61496 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ddx4Q61496 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
Ddx4Q61496 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ddx4Q61496 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ddx4Q61496 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ddx4Q61496 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ddx4Q61496 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Ddx4Q61496 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Ddx4Q61496 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC22.24■■□□□ 1.15
Ddx4Q61496 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
Ddx4Q61496 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC22.24■■□□□ 1.15
Ddx4Q61496 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ddx4Q61496 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ddx4Q61496 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ddx4Q61496 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ddx4Q61496 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ddx4Q61496 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC22.23■■□□□ 1.15
Ddx4Q61496 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Ddx4Q61496 Mir6236-201ENSMUST00000184437 123 ntBASIC22.23■■□□□ 1.15
Ddx4Q61496 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
Ddx4Q61496 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Ddx4Q61496 Reep4-203ENSMUST00000226563 1444 ntBASIC22.23■■□□□ 1.15
Ddx4Q61496 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Ddx4Q61496 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ddx4Q61496 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ddx4Q61496 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Ddx4Q61496 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
Ddx4Q61496 Nespas-201ENSMUST00000143738 1083 ntBASIC22.22■■□□□ 1.15
Ddx4Q61496 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Ddx4Q61496 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ddx4Q61496 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC22.22■■□□□ 1.15
Ddx4Q61496 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ddx4Q61496 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ddx4Q61496 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms