Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hcfc1Q61191 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.19■□□□□ 0.34
Hcfc1Q61191 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hcfc1Q61191 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Hcfc1Q61191 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.18■□□□□ 0.34
Hcfc1Q61191 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hcfc1Q61191 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hcfc1Q61191 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hcfc1Q61191 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hcfc1Q61191 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hcfc1Q61191 Reep4-203ENSMUST00000226563 1444 ntBASIC17.17■□□□□ 0.34
Hcfc1Q61191 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Hcfc1Q61191 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hcfc1Q61191 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hcfc1Q61191 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Hcfc1Q61191 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hcfc1Q61191 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hcfc1Q61191 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hcfc1Q61191 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hcfc1Q61191 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hcfc1Q61191 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Hcfc1Q61191 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hcfc1Q61191 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hcfc1Q61191 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Hcfc1Q61191 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hcfc1Q61191 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hcfc1Q61191 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hcfc1Q61191 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.16■□□□□ 0.34
Hcfc1Q61191 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hcfc1Q61191 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Hcfc1Q61191 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hcfc1Q61191 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Hcfc1Q61191 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hcfc1Q61191 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hcfc1Q61191 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hcfc1Q61191 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hcfc1Q61191 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hcfc1Q61191 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.14■□□□□ 0.34
Hcfc1Q61191 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.14■□□□□ 0.33
Hcfc1Q61191 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.14■□□□□ 0.33
Hcfc1Q61191 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.14■□□□□ 0.33
Hcfc1Q61191 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.13■□□□□ 0.33
Hcfc1Q61191 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.13■□□□□ 0.33
Hcfc1Q61191 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.13■□□□□ 0.33
Hcfc1Q61191 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hcfc1Q61191 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.13■□□□□ 0.33
Hcfc1Q61191 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Hcfc1Q61191 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Hcfc1Q61191 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hcfc1Q61191 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hcfc1Q61191 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hcfc1Q61191 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hcfc1Q61191 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hcfc1Q61191 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.13■□□□□ 0.33
Hcfc1Q61191 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hcfc1Q61191 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Hcfc1Q61191 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hcfc1Q61191 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Hcfc1Q61191 Gm12441-201ENSMUST00000121806 588 ntBASIC17.12■□□□□ 0.33
Hcfc1Q61191 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hcfc1Q61191 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.12■□□□□ 0.33
Hcfc1Q61191 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hcfc1Q61191 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hcfc1Q61191 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hcfc1Q61191 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hcfc1Q61191 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Hcfc1Q61191 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hcfc1Q61191 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcfc1Q61191 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcfc1Q61191 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcfc1Q61191 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcfc1Q61191 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcfc1Q61191 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcfc1Q61191 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hcfc1Q61191 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.11■□□□□ 0.33
Hcfc1Q61191 Gm10602-201ENSMUST00000098239 609 ntBASIC17.11■□□□□ 0.33
Hcfc1Q61191 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcfc1Q61191 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hcfc1Q61191 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hcfc1Q61191 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Hcfc1Q61191 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hcfc1Q61191 Nespas-201ENSMUST00000143738 1083 ntBASIC17.1■□□□□ 0.33
Hcfc1Q61191 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hcfc1Q61191 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.1■□□□□ 0.33
Hcfc1Q61191 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.1■□□□□ 0.33
Hcfc1Q61191 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hcfc1Q61191 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hcfc1Q61191 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hcfc1Q61191 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hcfc1Q61191 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Hcfc1Q61191 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.09■□□□□ 0.33
Hcfc1Q61191 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.09■□□□□ 0.33
Hcfc1Q61191 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Hcfc1Q61191 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hcfc1Q61191 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hcfc1Q61191 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hcfc1Q61191 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Hcfc1Q61191 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Hcfc1Q61191 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hcfc1Q61191 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms