Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
Ptch1Q61115 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
Ptch1Q61115 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.35
Ptch1Q61115 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
Ptch1Q61115 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC29.76■■■□□ 2.35
Ptch1Q61115 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC29.75■■■□□ 2.35
Ptch1Q61115 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
Ptch1Q61115 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Ptch1Q61115 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Ptch1Q61115 Gm20760-201ENSMUST00000179197 648 ntBASIC29.73■■■□□ 2.35
Ptch1Q61115 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
Ptch1Q61115 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC29.73■■■□□ 2.35
Ptch1Q61115 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC29.73■■■□□ 2.35
Ptch1Q61115 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Ptch1Q61115 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
Ptch1Q61115 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC29.72■■■□□ 2.35
Ptch1Q61115 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
Ptch1Q61115 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC29.72■■■□□ 2.35
Ptch1Q61115 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Ptch1Q61115 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
Ptch1Q61115 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Ptch1Q61115 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Ptch1Q61115 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Ptch1Q61115 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
Ptch1Q61115 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC29.71■■■□□ 2.35
Ptch1Q61115 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Ptch1Q61115 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC29.71■■■□□ 2.35
Ptch1Q61115 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Ptch1Q61115 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC29.71■■■□□ 2.35
Ptch1Q61115 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Ptch1Q61115 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
Ptch1Q61115 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC29.7■■■□□ 2.35
Ptch1Q61115 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC29.7■■■□□ 2.35
Ptch1Q61115 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
Ptch1Q61115 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.34
Ptch1Q61115 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
Ptch1Q61115 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
Ptch1Q61115 Gm27801-201ENSMUST00000184174 223 ntBASIC29.69■■■□□ 2.34
Ptch1Q61115 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC29.69■■■□□ 2.34
Ptch1Q61115 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Ptch1Q61115 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Ptch1Q61115 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC29.68■■■□□ 2.34
Ptch1Q61115 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC29.68■■■□□ 2.34
Ptch1Q61115 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Ptch1Q61115 Gm13148-201ENSMUST00000118892 745 ntBASIC29.67■■■□□ 2.34
Ptch1Q61115 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC29.67■■■□□ 2.34
Ptch1Q61115 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC29.67■■■□□ 2.34
Ptch1Q61115 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
Ptch1Q61115 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Ptch1Q61115 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Ptch1Q61115 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC29.66■■■□□ 2.34
Ptch1Q61115 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC29.66■■■□□ 2.34
Ptch1Q61115 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Ptch1Q61115 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Ptch1Q61115 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Ptch1Q61115 AC164883.3-201ENSMUST00000227396 1774 ntBASIC29.65■■■□□ 2.34
Ptch1Q61115 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
Ptch1Q61115 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Ptch1Q61115 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Ptch1Q61115 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Ptch1Q61115 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC29.65■■■□□ 2.34
Ptch1Q61115 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC29.65■■■□□ 2.34
Ptch1Q61115 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC29.65■■■□□ 2.34
Ptch1Q61115 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC29.64■■■□□ 2.34
Ptch1Q61115 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
Ptch1Q61115 Gm43859-201ENSMUST00000200075 1412 ntBASIC29.64■■■□□ 2.33
Ptch1Q61115 Gm22325-201ENSMUST00000158904 308 ntBASIC29.63■■■□□ 2.33
Ptch1Q61115 Mir7071-201ENSMUST00000184847 69 ntBASIC29.63■■■□□ 2.33
Ptch1Q61115 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC29.63■■■□□ 2.33
Ptch1Q61115 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC29.63■■■□□ 2.33
Ptch1Q61115 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Ptch1Q61115 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
Ptch1Q61115 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC29.62■■■□□ 2.33
Ptch1Q61115 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Ptch1Q61115 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Ptch1Q61115 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
Ptch1Q61115 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC29.62■■■□□ 2.33
Ptch1Q61115 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC29.62■■■□□ 2.33
Ptch1Q61115 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Ptch1Q61115 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
Ptch1Q61115 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Ptch1Q61115 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
Ptch1Q61115 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Ptch1Q61115 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC29.61■■■□□ 2.33
Ptch1Q61115 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC29.61■■■□□ 2.33
Ptch1Q61115 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC29.61■■■□□ 2.33
Ptch1Q61115 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC29.61■■■□□ 2.33
Ptch1Q61115 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
Ptch1Q61115 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Ptch1Q61115 Gm8520-201ENSMUST00000186517 868 ntBASIC29.6■■■□□ 2.33
Ptch1Q61115 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Ptch1Q61115 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC29.59■■■□□ 2.33
Ptch1Q61115 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
Ptch1Q61115 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
Ptch1Q61115 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC29.59■■■□□ 2.33
Ptch1Q61115 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC29.58■■■□□ 2.33
Ptch1Q61115 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Ptch1Q61115 Gm42418-201ENSMUST00000182010 1831 ntBASIC29.57■■■□□ 2.32
Ptch1Q61115 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Ptch1Q61115 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms