Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
Slc6a4Q60857 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc6a4Q60857 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.71■□□□□ 0.91
Slc6a4Q60857 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc6a4Q60857 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Slc6a4Q60857 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc6a4Q60857 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc6a4Q60857 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Slc6a4Q60857 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc6a4Q60857 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc6a4Q60857 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.71■□□□□ 0.91
Slc6a4Q60857 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc6a4Q60857 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc6a4Q60857 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc6a4Q60857 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
Slc6a4Q60857 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.7■□□□□ 0.9
Slc6a4Q60857 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.7■□□□□ 0.9
Slc6a4Q60857 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Slc6a4Q60857 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc6a4Q60857 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc6a4Q60857 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.69■□□□□ 0.9
Slc6a4Q60857 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Slc6a4Q60857 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.69■□□□□ 0.9
Slc6a4Q60857 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Slc6a4Q60857 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.69■□□□□ 0.9
Slc6a4Q60857 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Slc6a4Q60857 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc6a4Q60857 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.68■□□□□ 0.9
Slc6a4Q60857 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc6a4Q60857 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc6a4Q60857 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.68■□□□□ 0.9
Slc6a4Q60857 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc6a4Q60857 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.68■□□□□ 0.9
Slc6a4Q60857 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc6a4Q60857 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc6a4Q60857 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc6a4Q60857 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Slc6a4Q60857 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc6a4Q60857 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc6a4Q60857 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc6a4Q60857 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Slc6a4Q60857 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Slc6a4Q60857 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc6a4Q60857 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Slc6a4Q60857 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.66■□□□□ 0.9
Slc6a4Q60857 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.66■□□□□ 0.9
Slc6a4Q60857 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc6a4Q60857 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc6a4Q60857 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc6a4Q60857 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Slc6a4Q60857 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Slc6a4Q60857 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc6a4Q60857 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.65■□□□□ 0.9
Slc6a4Q60857 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
Slc6a4Q60857 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Slc6a4Q60857 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Slc6a4Q60857 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.65■□□□□ 0.9
Slc6a4Q60857 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.65■□□□□ 0.9
Slc6a4Q60857 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc6a4Q60857 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Slc6a4Q60857 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Slc6a4Q60857 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc6a4Q60857 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc6a4Q60857 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Slc6a4Q60857 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Slc6a4Q60857 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slc6a4Q60857 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
Slc6a4Q60857 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.64■□□□□ 0.89
Slc6a4Q60857 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Slc6a4Q60857 Mir6236-201ENSMUST00000184437 123 ntBASIC20.64■□□□□ 0.89
Slc6a4Q60857 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slc6a4Q60857 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Slc6a4Q60857 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Slc6a4Q60857 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc6a4Q60857 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc6a4Q60857 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Slc6a4Q60857 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.63■□□□□ 0.89
Slc6a4Q60857 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc6a4Q60857 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc6a4Q60857 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Slc6a4Q60857 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Slc6a4Q60857 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc6a4Q60857 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Slc6a4Q60857 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc6a4Q60857 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc6a4Q60857 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc6a4Q60857 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc6a4Q60857 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc6a4Q60857 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc6a4Q60857 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc6a4Q60857 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc6a4Q60857 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc6a4Q60857 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc6a4Q60857 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc6a4Q60857 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Slc6a4Q60857 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Slc6a4Q60857 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc6a4Q60857 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Slc6a4Q60857 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.6■□□□□ 0.89
Slc6a4Q60857 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms