Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.34■□□□□ 0.85
Col12a1Q60847 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col12a1Q60847 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.34■□□□□ 0.85
Col12a1Q60847 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Col12a1Q60847 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.33■□□□□ 0.85
Col12a1Q60847 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Col12a1Q60847 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Col12a1Q60847 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col12a1Q60847 Gm9988-201ENSMUST00000069786 435 ntBASIC20.33■□□□□ 0.85
Col12a1Q60847 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Col12a1Q60847 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Col12a1Q60847 Gm7514-201ENSMUST00000209475 934 ntBASIC20.32■□□□□ 0.84
Col12a1Q60847 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col12a1Q60847 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Col12a1Q60847 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.32■□□□□ 0.84
Col12a1Q60847 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Col12a1Q60847 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Col12a1Q60847 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col12a1Q60847 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.31■□□□□ 0.84
Col12a1Q60847 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.31■□□□□ 0.84
Col12a1Q60847 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col12a1Q60847 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col12a1Q60847 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Col12a1Q60847 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.31■□□□□ 0.84
Col12a1Q60847 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Col12a1Q60847 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Col12a1Q60847 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.31■□□□□ 0.84
Col12a1Q60847 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Col12a1Q60847 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col12a1Q60847 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Col12a1Q60847 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col12a1Q60847 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.3■□□□□ 0.84
Col12a1Q60847 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Col12a1Q60847 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.3■□□□□ 0.84
Col12a1Q60847 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col12a1Q60847 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col12a1Q60847 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col12a1Q60847 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col12a1Q60847 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col12a1Q60847 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col12a1Q60847 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col12a1Q60847 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
Col12a1Q60847 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.29■□□□□ 0.84
Col12a1Q60847 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col12a1Q60847 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col12a1Q60847 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Col12a1Q60847 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col12a1Q60847 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Col12a1Q60847 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col12a1Q60847 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col12a1Q60847 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col12a1Q60847 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col12a1Q60847 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Col12a1Q60847 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col12a1Q60847 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Col12a1Q60847 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.27■□□□□ 0.84
Col12a1Q60847 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col12a1Q60847 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Col12a1Q60847 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Col12a1Q60847 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.27■□□□□ 0.84
Col12a1Q60847 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col12a1Q60847 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col12a1Q60847 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Col12a1Q60847 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Col12a1Q60847 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Col12a1Q60847 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Col12a1Q60847 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Col12a1Q60847 Gm10812-201ENSMUST00000099864 546 ntBASIC20.27■□□□□ 0.83
Col12a1Q60847 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Col12a1Q60847 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col12a1Q60847 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col12a1Q60847 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Col12a1Q60847 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Col12a1Q60847 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col12a1Q60847 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Col12a1Q60847 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col12a1Q60847 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col12a1Q60847 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.25■□□□□ 0.83
Col12a1Q60847 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col12a1Q60847 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.25■□□□□ 0.83
Col12a1Q60847 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col12a1Q60847 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col12a1Q60847 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col12a1Q60847 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.25■□□□□ 0.83
Col12a1Q60847 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Col12a1Q60847 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col12a1Q60847 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Col12a1Q60847 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col12a1Q60847 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col12a1Q60847 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col12a1Q60847 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col12a1Q60847 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col12a1Q60847 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col12a1Q60847 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Col12a1Q60847 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col12a1Q60847 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Col12a1Q60847 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.23■□□□□ 0.83
Col12a1Q60847 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col12a1Q60847 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col12a1Q60847 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms