Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ClpbQ60649 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ClpbQ60649 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ClpbQ60649 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
ClpbQ60649 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ClpbQ60649 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ClpbQ60649 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
ClpbQ60649 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ClpbQ60649 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ClpbQ60649 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ClpbQ60649 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ClpbQ60649 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
ClpbQ60649 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ClpbQ60649 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.25■□□□□ 0.67
ClpbQ60649 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ClpbQ60649 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.25■□□□□ 0.67
ClpbQ60649 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
ClpbQ60649 Gm9870-201ENSMUST00000063874 645 ntBASIC19.25■□□□□ 0.67
ClpbQ60649 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ClpbQ60649 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
ClpbQ60649 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ClpbQ60649 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ClpbQ60649 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ClpbQ60649 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ClpbQ60649 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ClpbQ60649 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ClpbQ60649 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
ClpbQ60649 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ClpbQ60649 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ClpbQ60649 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
ClpbQ60649 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.24■□□□□ 0.67
ClpbQ60649 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ClpbQ60649 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ClpbQ60649 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ClpbQ60649 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ClpbQ60649 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ClpbQ60649 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ClpbQ60649 Golgb1-201ENSMUST00000023534 498 ntBASIC19.23■□□□□ 0.67
ClpbQ60649 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ClpbQ60649 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ClpbQ60649 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
ClpbQ60649 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.23■□□□□ 0.67
ClpbQ60649 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ClpbQ60649 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ClpbQ60649 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ClpbQ60649 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ClpbQ60649 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ClpbQ60649 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ClpbQ60649 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ClpbQ60649 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ClpbQ60649 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ClpbQ60649 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ClpbQ60649 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
ClpbQ60649 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ClpbQ60649 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
ClpbQ60649 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ClpbQ60649 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ClpbQ60649 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.21■□□□□ 0.67
ClpbQ60649 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ClpbQ60649 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ClpbQ60649 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ClpbQ60649 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ClpbQ60649 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ClpbQ60649 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ClpbQ60649 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ClpbQ60649 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
ClpbQ60649 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ClpbQ60649 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ClpbQ60649 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ClpbQ60649 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ClpbQ60649 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ClpbQ60649 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ClpbQ60649 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
ClpbQ60649 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ClpbQ60649 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ClpbQ60649 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ClpbQ60649 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ClpbQ60649 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ClpbQ60649 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ClpbQ60649 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ClpbQ60649 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
ClpbQ60649 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ClpbQ60649 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.19■□□□□ 0.66
ClpbQ60649 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.19■□□□□ 0.66
ClpbQ60649 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ClpbQ60649 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.19■□□□□ 0.66
ClpbQ60649 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ClpbQ60649 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ClpbQ60649 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ClpbQ60649 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ClpbQ60649 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
ClpbQ60649 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ClpbQ60649 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ClpbQ60649 Gm21956-201ENSMUST00000179946 522 ntBASIC19.18■□□□□ 0.66
ClpbQ60649 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.18■□□□□ 0.66
ClpbQ60649 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ClpbQ60649 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.18■□□□□ 0.66
ClpbQ60649 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ClpbQ60649 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
ClpbQ60649 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms