Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Xrcc1Q60596 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Xrcc1Q60596 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Xrcc1Q60596 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.22■□□□□ 0.67
Xrcc1Q60596 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Xrcc1Q60596 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Xrcc1Q60596 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Xrcc1Q60596 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.22■□□□□ 0.67
Xrcc1Q60596 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.22■□□□□ 0.67
Xrcc1Q60596 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Xrcc1Q60596 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Xrcc1Q60596 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Xrcc1Q60596 Gm12821-201ENSMUST00000120022 600 ntBASIC19.21■□□□□ 0.67
Xrcc1Q60596 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Xrcc1Q60596 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Xrcc1Q60596 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Xrcc1Q60596 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.21■□□□□ 0.67
Xrcc1Q60596 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Xrcc1Q60596 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.21■□□□□ 0.67
Xrcc1Q60596 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Xrcc1Q60596 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Xrcc1Q60596 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
Xrcc1Q60596 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Xrcc1Q60596 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Xrcc1Q60596 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Xrcc1Q60596 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.2■□□□□ 0.66
Xrcc1Q60596 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Xrcc1Q60596 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Xrcc1Q60596 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Xrcc1Q60596 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Xrcc1Q60596 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Xrcc1Q60596 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Xrcc1Q60596 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Xrcc1Q60596 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Xrcc1Q60596 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Xrcc1Q60596 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Xrcc1Q60596 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Xrcc1Q60596 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Xrcc1Q60596 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.19■□□□□ 0.66
Xrcc1Q60596 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Xrcc1Q60596 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Xrcc1Q60596 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Xrcc1Q60596 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Xrcc1Q60596 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Xrcc1Q60596 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Xrcc1Q60596 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Xrcc1Q60596 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.18■□□□□ 0.66
Xrcc1Q60596 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.18■□□□□ 0.66
Xrcc1Q60596 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Xrcc1Q60596 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Xrcc1Q60596 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Xrcc1Q60596 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Xrcc1Q60596 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Xrcc1Q60596 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Xrcc1Q60596 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.17■□□□□ 0.66
Xrcc1Q60596 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Xrcc1Q60596 Gm27454-201ENSMUST00000185090 204 ntBASIC19.17■□□□□ 0.66
Xrcc1Q60596 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Xrcc1Q60596 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Xrcc1Q60596 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.17■□□□□ 0.66
Xrcc1Q60596 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.16■□□□□ 0.66
Xrcc1Q60596 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Xrcc1Q60596 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Xrcc1Q60596 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.16■□□□□ 0.66
Xrcc1Q60596 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Xrcc1Q60596 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Xrcc1Q60596 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Xrcc1Q60596 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Xrcc1Q60596 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Xrcc1Q60596 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Xrcc1Q60596 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Xrcc1Q60596 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Xrcc1Q60596 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Xrcc1Q60596 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Xrcc1Q60596 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Xrcc1Q60596 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Xrcc1Q60596 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Xrcc1Q60596 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Xrcc1Q60596 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Xrcc1Q60596 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Xrcc1Q60596 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Xrcc1Q60596 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Xrcc1Q60596 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.14■□□□□ 0.66
Xrcc1Q60596 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Xrcc1Q60596 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Xrcc1Q60596 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.14■□□□□ 0.65
Xrcc1Q60596 Gm43137-201ENSMUST00000198052 594 ntBASIC19.14■□□□□ 0.65
Xrcc1Q60596 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Xrcc1Q60596 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Xrcc1Q60596 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Xrcc1Q60596 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.14■□□□□ 0.65
Xrcc1Q60596 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Xrcc1Q60596 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Xrcc1Q60596 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Xrcc1Q60596 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Xrcc1Q60596 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.13■□□□□ 0.65
Xrcc1Q60596 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Xrcc1Q60596 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Xrcc1Q60596 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Xrcc1Q60596 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms