Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Gm10033-202ENSMUST00000211874 928 ntBASIC20.57■□□□□ 0.88
Rnf43Q5NCP0 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf43Q5NCP0 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf43Q5NCP0 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.56■□□□□ 0.88
Rnf43Q5NCP0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.56■□□□□ 0.88
Rnf43Q5NCP0 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf43Q5NCP0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf43Q5NCP0 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf43Q5NCP0 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf43Q5NCP0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf43Q5NCP0 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf43Q5NCP0 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.56■□□□□ 0.88
Rnf43Q5NCP0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf43Q5NCP0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf43Q5NCP0 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.56■□□□□ 0.88
Rnf43Q5NCP0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf43Q5NCP0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.55■□□□□ 0.88
Rnf43Q5NCP0 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.55■□□□□ 0.88
Rnf43Q5NCP0 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Rnf43Q5NCP0 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.55■□□□□ 0.88
Rnf43Q5NCP0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.55■□□□□ 0.88
Rnf43Q5NCP0 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.55■□□□□ 0.88
Rnf43Q5NCP0 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Rnf43Q5NCP0 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf43Q5NCP0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf43Q5NCP0 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.54■□□□□ 0.88
Rnf43Q5NCP0 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf43Q5NCP0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf43Q5NCP0 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
Rnf43Q5NCP0 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf43Q5NCP0 Gm18671-201ENSMUST00000214826 683 ntBASIC20.54■□□□□ 0.88
Rnf43Q5NCP0 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf43Q5NCP0 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf43Q5NCP0 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf43Q5NCP0 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.54■□□□□ 0.88
Rnf43Q5NCP0 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf43Q5NCP0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf43Q5NCP0 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf43Q5NCP0 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf43Q5NCP0 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf43Q5NCP0 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf43Q5NCP0 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf43Q5NCP0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Rnf43Q5NCP0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf43Q5NCP0 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.53■□□□□ 0.88
Rnf43Q5NCP0 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf43Q5NCP0 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf43Q5NCP0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf43Q5NCP0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf43Q5NCP0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf43Q5NCP0 AV356131-201ENSMUST00000206201 750 ntBASIC20.52■□□□□ 0.88
Rnf43Q5NCP0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.52■□□□□ 0.87
Rnf43Q5NCP0 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf43Q5NCP0 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.51■□□□□ 0.87
Rnf43Q5NCP0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf43Q5NCP0 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.51■□□□□ 0.87
Rnf43Q5NCP0 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf43Q5NCP0 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf43Q5NCP0 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf43Q5NCP0 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf43Q5NCP0 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf43Q5NCP0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf43Q5NCP0 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf43Q5NCP0 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf43Q5NCP0 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.5■□□□□ 0.87
Rnf43Q5NCP0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Rnf43Q5NCP0 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf43Q5NCP0 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf43Q5NCP0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.5■□□□□ 0.87
Rnf43Q5NCP0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf43Q5NCP0 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf43Q5NCP0 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf43Q5NCP0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf43Q5NCP0 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf43Q5NCP0 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf43Q5NCP0 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf43Q5NCP0 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf43Q5NCP0 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf43Q5NCP0 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf43Q5NCP0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Rnf43Q5NCP0 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Rnf43Q5NCP0 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.48■□□□□ 0.87
Rnf43Q5NCP0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Rnf43Q5NCP0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Rnf43Q5NCP0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf43Q5NCP0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Rnf43Q5NCP0 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf43Q5NCP0 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf43Q5NCP0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.47■□□□□ 0.87
Rnf43Q5NCP0 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf43Q5NCP0 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf43Q5NCP0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.47■□□□□ 0.87
Rnf43Q5NCP0 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.47■□□□□ 0.87
Rnf43Q5NCP0 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf43Q5NCP0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf43Q5NCP0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf43Q5NCP0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Rnf43Q5NCP0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf43Q5NCP0 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Rnf43Q5NCP0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms