Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC36.15■■■■□ 3.38
Pds5bQ4VA53 Gm7290-201ENSMUST00000104990 617 ntBASIC36.15■■■■□ 3.38
Pds5bQ4VA53 Gm13181-201ENSMUST00000120117 1069 ntBASIC36.15■■■■□ 3.38
Pds5bQ4VA53 Gm12918-201ENSMUST00000120234 636 ntBASIC36.15■■■■□ 3.38
Pds5bQ4VA53 Gm15710-201ENSMUST00000121821 636 ntBASIC36.15■■■■□ 3.38
Pds5bQ4VA53 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC36.15■■■■□ 3.38
Pds5bQ4VA53 Gm5075-201ENSMUST00000196916 622 ntBASIC36.15■■■■□ 3.38
Pds5bQ4VA53 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC36.15■■■■□ 3.38
Pds5bQ4VA53 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC36.15■■■■□ 3.38
Pds5bQ4VA53 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC36.14■■■■□ 3.38
Pds5bQ4VA53 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC36.14■■■■□ 3.38
Pds5bQ4VA53 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC36.14■■■■□ 3.38
Pds5bQ4VA53 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC36.14■■■■□ 3.38
Pds5bQ4VA53 Gm5408-201ENSMUST00000197998 747 ntBASIC36.14■■■■□ 3.38
Pds5bQ4VA53 Gm13836-201ENSMUST00000121159 501 ntBASIC36.13■■■■□ 3.37
Pds5bQ4VA53 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC36.13■■■■□ 3.37
Pds5bQ4VA53 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC36.12■■■■□ 3.37
Pds5bQ4VA53 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC36.12■■■■□ 3.37
Pds5bQ4VA53 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC36.12■■■■□ 3.37
Pds5bQ4VA53 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC36.11■■■■□ 3.37
Pds5bQ4VA53 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC36.11■■■■□ 3.37
Pds5bQ4VA53 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC36.11■■■■□ 3.37
Pds5bQ4VA53 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC36.11■■■■□ 3.37
Pds5bQ4VA53 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC36.1■■■■□ 3.37
Pds5bQ4VA53 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC36.1■■■■□ 3.37
Pds5bQ4VA53 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC36.1■■■■□ 3.37
Pds5bQ4VA53 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC36.1■■■■□ 3.37
Pds5bQ4VA53 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
Pds5bQ4VA53 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
Pds5bQ4VA53 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC36.07■■■■□ 3.37
Pds5bQ4VA53 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC36.07■■■■□ 3.36
Pds5bQ4VA53 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC36.07■■■■□ 3.36
Pds5bQ4VA53 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC36.07■■■■□ 3.36
Pds5bQ4VA53 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC36.06■■■■□ 3.36
Pds5bQ4VA53 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC36.06■■■■□ 3.36
Pds5bQ4VA53 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC36.06■■■■□ 3.36
Pds5bQ4VA53 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC36.05■■■■□ 3.36
Pds5bQ4VA53 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC36.05■■■■□ 3.36
Pds5bQ4VA53 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC36.04■■■■□ 3.36
Pds5bQ4VA53 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC36.04■■■■□ 3.36
Pds5bQ4VA53 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC36.04■■■■□ 3.36
Pds5bQ4VA53 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC36.03■■■■□ 3.36
Pds5bQ4VA53 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC36.03■■■■□ 3.36
Pds5bQ4VA53 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC36.03■■■■□ 3.36
Pds5bQ4VA53 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC36.02■■■■□ 3.36
Pds5bQ4VA53 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC36.02■■■■□ 3.36
Pds5bQ4VA53 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC36.02■■■■□ 3.36
Pds5bQ4VA53 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC36.02■■■■□ 3.36
Pds5bQ4VA53 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC36.02■■■■□ 3.36
Pds5bQ4VA53 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC36.01■■■■□ 3.36
Pds5bQ4VA53 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC36.01■■■■□ 3.36
Pds5bQ4VA53 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC36.01■■■■□ 3.36
Pds5bQ4VA53 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC36.01■■■■□ 3.35
Pds5bQ4VA53 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC36■■■■□ 3.35
Pds5bQ4VA53 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC36■■■■□ 3.35
Pds5bQ4VA53 Gm29994-201ENSMUST00000195495 1193 ntBASIC36■■■■□ 3.35
Pds5bQ4VA53 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC36■■■■□ 3.35
Pds5bQ4VA53 Gm13146-201ENSMUST00000118508 780 ntBASIC36■■■■□ 3.35
Pds5bQ4VA53 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC36■■■■□ 3.35
Pds5bQ4VA53 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC36■■■■□ 3.35
Pds5bQ4VA53 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC36■■■■□ 3.35
Pds5bQ4VA53 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC35.99■■■■□ 3.35
Pds5bQ4VA53 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC35.99■■■■□ 3.35
Pds5bQ4VA53 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC35.99■■■■□ 3.35
Pds5bQ4VA53 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
Pds5bQ4VA53 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC35.99■■■■□ 3.35
Pds5bQ4VA53 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC35.99■■■■□ 3.35
Pds5bQ4VA53 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC35.99■■■■□ 3.35
Pds5bQ4VA53 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC35.99■■■■□ 3.35
Pds5bQ4VA53 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC35.98■■■■□ 3.35
Pds5bQ4VA53 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC35.98■■■■□ 3.35
Pds5bQ4VA53 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC35.98■■■■□ 3.35
Pds5bQ4VA53 Gm44878-201ENSMUST00000205812 1295 ntBASIC35.98■■■■□ 3.35
Pds5bQ4VA53 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC35.97■■■■□ 3.35
Pds5bQ4VA53 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC35.97■■■■□ 3.35
Pds5bQ4VA53 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC35.97■■■■□ 3.35
Pds5bQ4VA53 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
Pds5bQ4VA53 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC35.96■■■■□ 3.35
Pds5bQ4VA53 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC35.95■■■■□ 3.35
Pds5bQ4VA53 AC122769.4-201ENSMUST00000228166 901 ntBASIC35.95■■■■□ 3.35
Pds5bQ4VA53 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC35.95■■■■□ 3.35
Pds5bQ4VA53 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC35.94■■■■□ 3.34
Pds5bQ4VA53 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC35.94■■■■□ 3.34
Pds5bQ4VA53 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC35.93■■■■□ 3.34
Pds5bQ4VA53 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC35.93■■■■□ 3.34
Pds5bQ4VA53 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC35.93■■■■□ 3.34
Pds5bQ4VA53 Trmt13-210ENSMUST00000198454 880 ntBASIC35.93■■■■□ 3.34
Pds5bQ4VA53 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC35.93■■■■□ 3.34
Pds5bQ4VA53 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
Pds5bQ4VA53 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
Pds5bQ4VA53 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC35.91■■■■□ 3.34
Pds5bQ4VA53 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC35.91■■■■□ 3.34
Pds5bQ4VA53 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC35.91■■■■□ 3.34
Pds5bQ4VA53 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC35.91■■■■□ 3.34
Pds5bQ4VA53 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC35.91■■■■□ 3.34
Pds5bQ4VA53 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC35.91■■■■□ 3.34
Pds5bQ4VA53 Gm6211-202ENSMUST00000167849 925 ntBASIC35.9■■■■□ 3.34
Pds5bQ4VA53 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC35.9■■■■□ 3.34
Pds5bQ4VA53 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC35.9■■■■□ 3.34
Pds5bQ4VA53 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms