Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Herc2Q4U2R1 Gm27275-201ENSMUST00000184318 272 ntBASIC12.37□□□□□ -0.43
Herc2Q4U2R1 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Herc2Q4U2R1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Herc2Q4U2R1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Herc2Q4U2R1 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Herc2Q4U2R1 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Herc2Q4U2R1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Herc2Q4U2R1 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Herc2Q4U2R1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Herc2Q4U2R1 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Herc2Q4U2R1 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Herc2Q4U2R1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Herc2Q4U2R1 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.36□□□□□ -0.43
Herc2Q4U2R1 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Herc2Q4U2R1 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Herc2Q4U2R1 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC12.36□□□□□ -0.43
Herc2Q4U2R1 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Herc2Q4U2R1 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Herc2Q4U2R1 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.36□□□□□ -0.43
Herc2Q4U2R1 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Herc2Q4U2R1 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Herc2Q4U2R1 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Herc2Q4U2R1 Gm10231-201ENSMUST00000181584 441 ntBASIC12.35□□□□□ -0.43
Herc2Q4U2R1 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Herc2Q4U2R1 Gm10175-202ENSMUST00000208752 441 ntBASIC12.35□□□□□ -0.43
Herc2Q4U2R1 Gm6365-201ENSMUST00000054711 744 ntBASIC12.35□□□□□ -0.43
Herc2Q4U2R1 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Herc2Q4U2R1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Herc2Q4U2R1 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Herc2Q4U2R1 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Herc2Q4U2R1 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Herc2Q4U2R1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Herc2Q4U2R1 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC12.35□□□□□ -0.43
Herc2Q4U2R1 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Herc2Q4U2R1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC12.35□□□□□ -0.43
Herc2Q4U2R1 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Herc2Q4U2R1 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Herc2Q4U2R1 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.34□□□□□ -0.43
Herc2Q4U2R1 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC12.34□□□□□ -0.43
Herc2Q4U2R1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC12.34□□□□□ -0.43
Herc2Q4U2R1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Herc2Q4U2R1 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Herc2Q4U2R1 Arhgef33-211ENSMUST00000225658 473 ntBASIC12.34□□□□□ -0.43
Herc2Q4U2R1 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Herc2Q4U2R1 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Herc2Q4U2R1 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Herc2Q4U2R1 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Herc2Q4U2R1 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.34□□□□□ -0.43
Herc2Q4U2R1 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Herc2Q4U2R1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC12.33□□□□□ -0.44
Herc2Q4U2R1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Herc2Q4U2R1 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Herc2Q4U2R1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Herc2Q4U2R1 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC12.33□□□□□ -0.44
Herc2Q4U2R1 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Herc2Q4U2R1 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Herc2Q4U2R1 Gm18101-201ENSMUST00000215769 548 ntBASIC12.33□□□□□ -0.44
Herc2Q4U2R1 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Herc2Q4U2R1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Herc2Q4U2R1 Gm27045-201ENSMUST00000182145 1402 ntBASIC12.33□□□□□ -0.44
Herc2Q4U2R1 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Herc2Q4U2R1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Herc2Q4U2R1 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Herc2Q4U2R1 AC153881.1-201ENSMUST00000214448 284 ntBASIC12.32□□□□□ -0.44
Herc2Q4U2R1 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Herc2Q4U2R1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Herc2Q4U2R1 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Herc2Q4U2R1 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Herc2Q4U2R1 Gm7290-201ENSMUST00000104990 617 ntBASIC12.32□□□□□ -0.44
Herc2Q4U2R1 Gm12918-201ENSMUST00000120234 636 ntBASIC12.32□□□□□ -0.44
Herc2Q4U2R1 Gm15710-201ENSMUST00000121821 636 ntBASIC12.32□□□□□ -0.44
Herc2Q4U2R1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC12.32□□□□□ -0.44
Herc2Q4U2R1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Herc2Q4U2R1 Gm26524-201ENSMUST00000192339 390 ntBASIC12.32□□□□□ -0.44
Herc2Q4U2R1 Gm5075-201ENSMUST00000196916 622 ntBASIC12.32□□□□□ -0.44
Herc2Q4U2R1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC12.32□□□□□ -0.44
Herc2Q4U2R1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC12.32□□□□□ -0.44
Herc2Q4U2R1 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Herc2Q4U2R1 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Herc2Q4U2R1 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Herc2Q4U2R1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC12.32□□□□□ -0.44
Herc2Q4U2R1 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Herc2Q4U2R1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Herc2Q4U2R1 Gm10517-202ENSMUST00000192970 758 ntBASIC12.31□□□□□ -0.44
Herc2Q4U2R1 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Herc2Q4U2R1 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Herc2Q4U2R1 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC12.31□□□□□ -0.44
Herc2Q4U2R1 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Herc2Q4U2R1 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Herc2Q4U2R1 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Herc2Q4U2R1 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Herc2Q4U2R1 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Herc2Q4U2R1 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Herc2Q4U2R1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Herc2Q4U2R1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Herc2Q4U2R1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Herc2Q4U2R1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Herc2Q4U2R1 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Herc2Q4U2R1 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms