Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.58■□□□□ 0.89
Trim80Q3V061 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.58■□□□□ 0.89
Trim80Q3V061 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.58■□□□□ 0.89
Trim80Q3V061 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.58■□□□□ 0.89
Trim80Q3V061 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim80Q3V061 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim80Q3V061 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Trim80Q3V061 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim80Q3V061 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Trim80Q3V061 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim80Q3V061 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim80Q3V061 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim80Q3V061 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.57■□□□□ 0.88
Trim80Q3V061 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim80Q3V061 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Trim80Q3V061 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trim80Q3V061 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trim80Q3V061 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim80Q3V061 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Trim80Q3V061 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim80Q3V061 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim80Q3V061 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim80Q3V061 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim80Q3V061 Etf1-202ENSMUST00000180351 108 ntBASIC20.56■□□□□ 0.88
Trim80Q3V061 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.56■□□□□ 0.88
Trim80Q3V061 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.56■□□□□ 0.88
Trim80Q3V061 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim80Q3V061 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Trim80Q3V061 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim80Q3V061 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim80Q3V061 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trim80Q3V061 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim80Q3V061 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Trim80Q3V061 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim80Q3V061 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim80Q3V061 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim80Q3V061 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim80Q3V061 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim80Q3V061 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.54■□□□□ 0.88
Trim80Q3V061 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim80Q3V061 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim80Q3V061 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Trim80Q3V061 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.54■□□□□ 0.88
Trim80Q3V061 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim80Q3V061 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim80Q3V061 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim80Q3V061 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trim80Q3V061 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Trim80Q3V061 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trim80Q3V061 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Trim80Q3V061 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Trim80Q3V061 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim80Q3V061 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim80Q3V061 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim80Q3V061 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Trim80Q3V061 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trim80Q3V061 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Trim80Q3V061 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trim80Q3V061 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim80Q3V061 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim80Q3V061 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim80Q3V061 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim80Q3V061 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim80Q3V061 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.52■□□□□ 0.88
Trim80Q3V061 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.52■□□□□ 0.88
Trim80Q3V061 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.52■□□□□ 0.88
Trim80Q3V061 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.52■□□□□ 0.88
Trim80Q3V061 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim80Q3V061 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trim80Q3V061 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim80Q3V061 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trim80Q3V061 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim80Q3V061 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Trim80Q3V061 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim80Q3V061 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.51■□□□□ 0.87
Trim80Q3V061 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trim80Q3V061 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Trim80Q3V061 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Trim80Q3V061 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim80Q3V061 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim80Q3V061 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trim80Q3V061 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim80Q3V061 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim80Q3V061 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim80Q3V061 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim80Q3V061 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.5■□□□□ 0.87
Trim80Q3V061 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trim80Q3V061 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trim80Q3V061 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim80Q3V061 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.5■□□□□ 0.87
Trim80Q3V061 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim80Q3V061 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim80Q3V061 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Trim80Q3V061 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim80Q3V061 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim80Q3V061 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trim80Q3V061 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trim80Q3V061 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim80Q3V061 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim80Q3V061 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms