Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Naf1Q3UMQ8 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Naf1Q3UMQ8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Naf1Q3UMQ8 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Naf1Q3UMQ8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Naf1Q3UMQ8 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Naf1Q3UMQ8 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Naf1Q3UMQ8 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Naf1Q3UMQ8 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Naf1Q3UMQ8 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.47■□□□□ 0.87
Naf1Q3UMQ8 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Naf1Q3UMQ8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Naf1Q3UMQ8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Naf1Q3UMQ8 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Naf1Q3UMQ8 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Naf1Q3UMQ8 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.46■□□□□ 0.87
Naf1Q3UMQ8 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Naf1Q3UMQ8 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Naf1Q3UMQ8 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Naf1Q3UMQ8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Naf1Q3UMQ8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
Naf1Q3UMQ8 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.45■□□□□ 0.86
Naf1Q3UMQ8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.45■□□□□ 0.86
Naf1Q3UMQ8 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Naf1Q3UMQ8 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.44■□□□□ 0.86
Naf1Q3UMQ8 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Naf1Q3UMQ8 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Naf1Q3UMQ8 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.44■□□□□ 0.86
Naf1Q3UMQ8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Naf1Q3UMQ8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.44■□□□□ 0.86
Naf1Q3UMQ8 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Naf1Q3UMQ8 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Naf1Q3UMQ8 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Naf1Q3UMQ8 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Naf1Q3UMQ8 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Naf1Q3UMQ8 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.44■□□□□ 0.86
Naf1Q3UMQ8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Naf1Q3UMQ8 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Naf1Q3UMQ8 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Naf1Q3UMQ8 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Naf1Q3UMQ8 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Naf1Q3UMQ8 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
Naf1Q3UMQ8 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Naf1Q3UMQ8 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.43■□□□□ 0.86
Naf1Q3UMQ8 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Naf1Q3UMQ8 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Naf1Q3UMQ8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Naf1Q3UMQ8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Naf1Q3UMQ8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Naf1Q3UMQ8 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Naf1Q3UMQ8 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Naf1Q3UMQ8 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Naf1Q3UMQ8 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Naf1Q3UMQ8 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.43■□□□□ 0.86
Naf1Q3UMQ8 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Naf1Q3UMQ8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Naf1Q3UMQ8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Naf1Q3UMQ8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Naf1Q3UMQ8 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Naf1Q3UMQ8 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Naf1Q3UMQ8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Naf1Q3UMQ8 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.42■□□□□ 0.86
Naf1Q3UMQ8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Naf1Q3UMQ8 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Naf1Q3UMQ8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Naf1Q3UMQ8 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Naf1Q3UMQ8 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Naf1Q3UMQ8 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Naf1Q3UMQ8 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Naf1Q3UMQ8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Naf1Q3UMQ8 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Naf1Q3UMQ8 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Naf1Q3UMQ8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.41■□□□□ 0.86
Naf1Q3UMQ8 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Naf1Q3UMQ8 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Naf1Q3UMQ8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Naf1Q3UMQ8 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Naf1Q3UMQ8 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Naf1Q3UMQ8 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Naf1Q3UMQ8 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Naf1Q3UMQ8 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Naf1Q3UMQ8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Naf1Q3UMQ8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Naf1Q3UMQ8 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.4■□□□□ 0.86
Naf1Q3UMQ8 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Naf1Q3UMQ8 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Naf1Q3UMQ8 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Naf1Q3UMQ8 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Naf1Q3UMQ8 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Naf1Q3UMQ8 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Naf1Q3UMQ8 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Naf1Q3UMQ8 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Naf1Q3UMQ8 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Naf1Q3UMQ8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Naf1Q3UMQ8 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.39■□□□□ 0.85
Naf1Q3UMQ8 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.39■□□□□ 0.85
Naf1Q3UMQ8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.39■□□□□ 0.85
Naf1Q3UMQ8 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Naf1Q3UMQ8 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Naf1Q3UMQ8 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms