Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nhej1Q3KNJ2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Nhej1Q3KNJ2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Nhej1Q3KNJ2 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nhej1Q3KNJ2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nhej1Q3KNJ2 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nhej1Q3KNJ2 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Nhej1Q3KNJ2 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nhej1Q3KNJ2 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.46■■□□□ 1.03
Nhej1Q3KNJ2 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nhej1Q3KNJ2 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nhej1Q3KNJ2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Nhej1Q3KNJ2 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nhej1Q3KNJ2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.46■■□□□ 1.03
Nhej1Q3KNJ2 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Nhej1Q3KNJ2 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nhej1Q3KNJ2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Nhej1Q3KNJ2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nhej1Q3KNJ2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
Nhej1Q3KNJ2 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Nhej1Q3KNJ2 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Nhej1Q3KNJ2 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Nhej1Q3KNJ2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
Nhej1Q3KNJ2 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Nhej1Q3KNJ2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nhej1Q3KNJ2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Nhej1Q3KNJ2 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nhej1Q3KNJ2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nhej1Q3KNJ2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Nhej1Q3KNJ2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nhej1Q3KNJ2 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Nhej1Q3KNJ2 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Nhej1Q3KNJ2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nhej1Q3KNJ2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Nhej1Q3KNJ2 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nhej1Q3KNJ2 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nhej1Q3KNJ2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Nhej1Q3KNJ2 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Nhej1Q3KNJ2 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nhej1Q3KNJ2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.42■■□□□ 1.02
Nhej1Q3KNJ2 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nhej1Q3KNJ2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nhej1Q3KNJ2 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.42■■□□□ 1.02
Nhej1Q3KNJ2 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nhej1Q3KNJ2 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nhej1Q3KNJ2 Gm5921-201ENSMUST00000075898 882 ntBASIC21.42■■□□□ 1.02
Nhej1Q3KNJ2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nhej1Q3KNJ2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Nhej1Q3KNJ2 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Nhej1Q3KNJ2 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Nhej1Q3KNJ2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Nhej1Q3KNJ2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Nhej1Q3KNJ2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nhej1Q3KNJ2 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nhej1Q3KNJ2 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.41■■□□□ 1.02
Nhej1Q3KNJ2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nhej1Q3KNJ2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Nhej1Q3KNJ2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
Nhej1Q3KNJ2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nhej1Q3KNJ2 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nhej1Q3KNJ2 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nhej1Q3KNJ2 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nhej1Q3KNJ2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Nhej1Q3KNJ2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Nhej1Q3KNJ2 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Nhej1Q3KNJ2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.4■■□□□ 1.02
Nhej1Q3KNJ2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Nhej1Q3KNJ2 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Nhej1Q3KNJ2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Nhej1Q3KNJ2 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.39■■□□□ 1.02
Nhej1Q3KNJ2 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.39■■□□□ 1.02
Nhej1Q3KNJ2 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.39■■□□□ 1.01
Nhej1Q3KNJ2 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Nhej1Q3KNJ2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nhej1Q3KNJ2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nhej1Q3KNJ2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
Nhej1Q3KNJ2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nhej1Q3KNJ2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nhej1Q3KNJ2 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nhej1Q3KNJ2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nhej1Q3KNJ2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nhej1Q3KNJ2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Nhej1Q3KNJ2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nhej1Q3KNJ2 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nhej1Q3KNJ2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Nhej1Q3KNJ2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nhej1Q3KNJ2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.38■■□□□ 1.01
Nhej1Q3KNJ2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nhej1Q3KNJ2 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nhej1Q3KNJ2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nhej1Q3KNJ2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Nhej1Q3KNJ2 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.37■■□□□ 1.01
Nhej1Q3KNJ2 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nhej1Q3KNJ2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Nhej1Q3KNJ2 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.37■■□□□ 1.01
Nhej1Q3KNJ2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nhej1Q3KNJ2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nhej1Q3KNJ2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nhej1Q3KNJ2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Nhej1Q3KNJ2 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms