Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
Col19a1Q0VF58 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Col19a1Q0VF58 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col19a1Q0VF58 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col19a1Q0VF58 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col19a1Q0VF58 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col19a1Q0VF58 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col19a1Q0VF58 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Col19a1Q0VF58 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Col19a1Q0VF58 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Col19a1Q0VF58 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Col19a1Q0VF58 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Col19a1Q0VF58 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.86■■□□□ 1.09
Col19a1Q0VF58 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
Col19a1Q0VF58 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col19a1Q0VF58 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Col19a1Q0VF58 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Col19a1Q0VF58 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.85■■□□□ 1.09
Col19a1Q0VF58 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col19a1Q0VF58 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Col19a1Q0VF58 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Col19a1Q0VF58 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Col19a1Q0VF58 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col19a1Q0VF58 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Col19a1Q0VF58 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Col19a1Q0VF58 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.84■■□□□ 1.09
Col19a1Q0VF58 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Col19a1Q0VF58 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Col19a1Q0VF58 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Col19a1Q0VF58 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Col19a1Q0VF58 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.83■■□□□ 1.09
Col19a1Q0VF58 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Col19a1Q0VF58 Gm13148-201ENSMUST00000118892 745 ntBASIC21.83■■□□□ 1.09
Col19a1Q0VF58 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC21.83■■□□□ 1.09
Col19a1Q0VF58 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Col19a1Q0VF58 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Col19a1Q0VF58 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Col19a1Q0VF58 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col19a1Q0VF58 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.82■■□□□ 1.08
Col19a1Q0VF58 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.82■■□□□ 1.08
Col19a1Q0VF58 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Col19a1Q0VF58 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Col19a1Q0VF58 Gm10812-201ENSMUST00000099864 546 ntBASIC21.82■■□□□ 1.08
Col19a1Q0VF58 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col19a1Q0VF58 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.82■■□□□ 1.08
Col19a1Q0VF58 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col19a1Q0VF58 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col19a1Q0VF58 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Col19a1Q0VF58 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Col19a1Q0VF58 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.81■■□□□ 1.08
Col19a1Q0VF58 Gm5408-201ENSMUST00000197998 747 ntBASIC21.81■■□□□ 1.08
Col19a1Q0VF58 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC21.81■■□□□ 1.08
Col19a1Q0VF58 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col19a1Q0VF58 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col19a1Q0VF58 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Col19a1Q0VF58 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.81■■□□□ 1.08
Col19a1Q0VF58 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.81■■□□□ 1.08
Col19a1Q0VF58 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.8■■□□□ 1.08
Col19a1Q0VF58 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col19a1Q0VF58 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC21.8■■□□□ 1.08
Col19a1Q0VF58 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col19a1Q0VF58 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col19a1Q0VF58 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Col19a1Q0VF58 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Col19a1Q0VF58 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col19a1Q0VF58 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col19a1Q0VF58 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Col19a1Q0VF58 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
Col19a1Q0VF58 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.79■■□□□ 1.08
Col19a1Q0VF58 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col19a1Q0VF58 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Col19a1Q0VF58 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Col19a1Q0VF58 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Col19a1Q0VF58 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Col19a1Q0VF58 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col19a1Q0VF58 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Col19a1Q0VF58 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC21.78■■□□□ 1.08
Col19a1Q0VF58 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Col19a1Q0VF58 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col19a1Q0VF58 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Col19a1Q0VF58 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.77■■□□□ 1.08
Col19a1Q0VF58 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Col19a1Q0VF58 Gm20049-201ENSMUST00000219950 730 ntBASIC21.77■■□□□ 1.08
Col19a1Q0VF58 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.77■■□□□ 1.08
Col19a1Q0VF58 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Col19a1Q0VF58 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Col19a1Q0VF58 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
Col19a1Q0VF58 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col19a1Q0VF58 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col19a1Q0VF58 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.76■■□□□ 1.07
Col19a1Q0VF58 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Col19a1Q0VF58 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Col19a1Q0VF58 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Col19a1Q0VF58 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col19a1Q0VF58 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col19a1Q0VF58 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Col19a1Q0VF58 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col19a1Q0VF58 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col19a1Q0VF58 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col19a1Q0VF58 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms