Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Hoxc4Q08624 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxc4Q08624 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxc4Q08624 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxc4Q08624 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxc4Q08624 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxc4Q08624 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
Hoxc4Q08624 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxc4Q08624 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxc4Q08624 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxc4Q08624 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxc4Q08624 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.49■□□□□ 0.71
Hoxc4Q08624 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.49■□□□□ 0.71
Hoxc4Q08624 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxc4Q08624 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxc4Q08624 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.49■□□□□ 0.71
Hoxc4Q08624 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxc4Q08624 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxc4Q08624 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxc4Q08624 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxc4Q08624 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxc4Q08624 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxc4Q08624 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Hoxc4Q08624 Gm43060-201ENSMUST00000200621 289 ntBASIC19.48■□□□□ 0.71
Hoxc4Q08624 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.48■□□□□ 0.71
Hoxc4Q08624 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxc4Q08624 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxc4Q08624 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Hoxc4Q08624 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxc4Q08624 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
Hoxc4Q08624 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxc4Q08624 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxc4Q08624 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Hoxc4Q08624 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxc4Q08624 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.47■□□□□ 0.71
Hoxc4Q08624 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.47■□□□□ 0.71
Hoxc4Q08624 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxc4Q08624 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Hoxc4Q08624 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxc4Q08624 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxc4Q08624 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Hoxc4Q08624 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Hoxc4Q08624 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.46■□□□□ 0.71
Hoxc4Q08624 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxc4Q08624 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxc4Q08624 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxc4Q08624 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Hoxc4Q08624 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxc4Q08624 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxc4Q08624 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxc4Q08624 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxc4Q08624 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxc4Q08624 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.44■□□□□ 0.7
Hoxc4Q08624 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxc4Q08624 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Hoxc4Q08624 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxc4Q08624 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.43■□□□□ 0.7
Hoxc4Q08624 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxc4Q08624 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.43■□□□□ 0.7
Hoxc4Q08624 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.43■□□□□ 0.7
Hoxc4Q08624 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.43■□□□□ 0.7
Hoxc4Q08624 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Hoxc4Q08624 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc4Q08624 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc4Q08624 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.42■□□□□ 0.7
Hoxc4Q08624 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc4Q08624 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Hoxc4Q08624 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc4Q08624 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc4Q08624 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc4Q08624 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc4Q08624 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc4Q08624 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc4Q08624 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc4Q08624 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc4Q08624 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.41■□□□□ 0.7
Hoxc4Q08624 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc4Q08624 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc4Q08624 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.41■□□□□ 0.7
Hoxc4Q08624 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc4Q08624 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc4Q08624 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.41■□□□□ 0.7
Hoxc4Q08624 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Hoxc4Q08624 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc4Q08624 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc4Q08624 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc4Q08624 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Hoxc4Q08624 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc4Q08624 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc4Q08624 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.4■□□□□ 0.7
Hoxc4Q08624 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.4■□□□□ 0.7
Hoxc4Q08624 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc4Q08624 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc4Q08624 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Hoxc4Q08624 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc4Q08624 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc4Q08624 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc4Q08624 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc4Q08624 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc4Q08624 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms