Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Gm43137-201ENSMUST00000198052 594 ntBASIC19.79■□□□□ 0.76
Sox4Q06831 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.79■□□□□ 0.76
Sox4Q06831 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Sox4Q06831 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sox4Q06831 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sox4Q06831 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.78■□□□□ 0.76
Sox4Q06831 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Sox4Q06831 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sox4Q06831 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sox4Q06831 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sox4Q06831 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sox4Q06831 Gm45417-201ENSMUST00000209533 758 ntBASIC19.78■□□□□ 0.76
Sox4Q06831 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Sox4Q06831 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sox4Q06831 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sox4Q06831 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Sox4Q06831 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sox4Q06831 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sox4Q06831 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Sox4Q06831 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sox4Q06831 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sox4Q06831 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Sox4Q06831 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Sox4Q06831 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.77■□□□□ 0.76
Sox4Q06831 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sox4Q06831 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sox4Q06831 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox4Q06831 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Sox4Q06831 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sox4Q06831 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox4Q06831 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.76■□□□□ 0.75
Sox4Q06831 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox4Q06831 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Sox4Q06831 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sox4Q06831 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox4Q06831 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox4Q06831 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox4Q06831 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox4Q06831 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox4Q06831 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.75■□□□□ 0.75
Sox4Q06831 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.75■□□□□ 0.75
Sox4Q06831 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sox4Q06831 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.75■□□□□ 0.75
Sox4Q06831 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sox4Q06831 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sox4Q06831 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox4Q06831 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sox4Q06831 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox4Q06831 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox4Q06831 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox4Q06831 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sox4Q06831 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox4Q06831 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox4Q06831 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Sox4Q06831 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sox4Q06831 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sox4Q06831 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox4Q06831 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox4Q06831 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Sox4Q06831 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sox4Q06831 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox4Q06831 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox4Q06831 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox4Q06831 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox4Q06831 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sox4Q06831 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox4Q06831 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox4Q06831 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sox4Q06831 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sox4Q06831 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Sox4Q06831 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox4Q06831 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.72■□□□□ 0.75
Sox4Q06831 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox4Q06831 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Sox4Q06831 Mir6236-201ENSMUST00000184437 123 ntBASIC19.72■□□□□ 0.75
Sox4Q06831 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox4Q06831 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Sox4Q06831 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox4Q06831 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Sox4Q06831 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sox4Q06831 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.71■□□□□ 0.75
Sox4Q06831 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sox4Q06831 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
Sox4Q06831 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox4Q06831 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sox4Q06831 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Sox4Q06831 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox4Q06831 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Sox4Q06831 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox4Q06831 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sox4Q06831 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.7■□□□□ 0.74
Sox4Q06831 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Sox4Q06831 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox4Q06831 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Sox4Q06831 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox4Q06831 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox4Q06831 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sox4Q06831 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Sox4Q06831 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sox4Q06831 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms