Protein–RNA interactions for Protein: P97471

Smad4, Mothers against decapentaplegic homolog 4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad4P97471 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Smad4P97471 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Smad4P97471 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smad4P97471 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Smad4P97471 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Smad4P97471 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.46■□□□□ 0.87
Smad4P97471 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.46■□□□□ 0.87
Smad4P97471 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Smad4P97471 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smad4P97471 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Smad4P97471 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Smad4P97471 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smad4P97471 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Smad4P97471 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.87
Smad4P97471 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.87
Smad4P97471 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.45■□□□□ 0.86
Smad4P97471 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Smad4P97471 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Smad4P97471 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Smad4P97471 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smad4P97471 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
Smad4P97471 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Smad4P97471 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smad4P97471 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smad4P97471 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Smad4P97471 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.44■□□□□ 0.86
Smad4P97471 Gm13168-201ENSMUST00000121771 632 ntBASIC20.44■□□□□ 0.86
Smad4P97471 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Smad4P97471 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Smad4P97471 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Smad4P97471 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smad4P97471 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smad4P97471 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Smad4P97471 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smad4P97471 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.43■□□□□ 0.86
Smad4P97471 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smad4P97471 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smad4P97471 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Smad4P97471 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smad4P97471 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Smad4P97471 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smad4P97471 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smad4P97471 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.42■□□□□ 0.86
Smad4P97471 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.42■□□□□ 0.86
Smad4P97471 Gm7977-201ENSMUST00000193787 748 ntBASIC20.42■□□□□ 0.86
Smad4P97471 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Smad4P97471 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Smad4P97471 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smad4P97471 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smad4P97471 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.41■□□□□ 0.86
Smad4P97471 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smad4P97471 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.41■□□□□ 0.86
Smad4P97471 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Smad4P97471 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smad4P97471 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Smad4P97471 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.4■□□□□ 0.86
Smad4P97471 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Smad4P97471 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smad4P97471 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.4■□□□□ 0.86
Smad4P97471 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Smad4P97471 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.4■□□□□ 0.86
Smad4P97471 Gm5408-201ENSMUST00000197998 747 ntBASIC20.4■□□□□ 0.86
Smad4P97471 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Smad4P97471 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smad4P97471 Gm10812-201ENSMUST00000099864 546 ntBASIC20.4■□□□□ 0.86
Smad4P97471 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Smad4P97471 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smad4P97471 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smad4P97471 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Smad4P97471 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smad4P97471 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Smad4P97471 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.38■□□□□ 0.85
Smad4P97471 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Smad4P97471 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.38■□□□□ 0.85
Smad4P97471 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.38■□□□□ 0.85
Smad4P97471 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.38■□□□□ 0.85
Smad4P97471 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Smad4P97471 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smad4P97471 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Smad4P97471 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smad4P97471 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Smad4P97471 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.37■□□□□ 0.85
Smad4P97471 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Smad4P97471 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smad4P97471 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Smad4P97471 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Smad4P97471 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.36■□□□□ 0.85
Smad4P97471 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.36■□□□□ 0.85
Smad4P97471 Gm7290-201ENSMUST00000104990 617 ntBASIC20.36■□□□□ 0.85
Smad4P97471 Gm12918-201ENSMUST00000120234 636 ntBASIC20.36■□□□□ 0.85
Smad4P97471 Gm15710-201ENSMUST00000121821 636 ntBASIC20.36■□□□□ 0.85
Smad4P97471 Gm5075-201ENSMUST00000196916 622 ntBASIC20.36■□□□□ 0.85
Smad4P97471 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.36■□□□□ 0.85
Smad4P97471 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Smad4P97471 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.36■□□□□ 0.85
Smad4P97471 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.36■□□□□ 0.85
Smad4P97471 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Smad4P97471 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.36■□□□□ 0.85
Smad4P97471 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smad4P97471 Gm13148-201ENSMUST00000118892 745 ntBASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms