Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh6P97326 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
Cdh6P97326 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh6P97326 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh6P97326 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.43■□□□□ 0.86
Cdh6P97326 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh6P97326 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh6P97326 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh6P97326 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.42■□□□□ 0.86
Cdh6P97326 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cdh6P97326 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cdh6P97326 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cdh6P97326 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cdh6P97326 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
Cdh6P97326 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cdh6P97326 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.42■□□□□ 0.86
Cdh6P97326 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Cdh6P97326 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cdh6P97326 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdh6P97326 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdh6P97326 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdh6P97326 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdh6P97326 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cdh6P97326 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.41■□□□□ 0.86
Cdh6P97326 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdh6P97326 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cdh6P97326 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.41■□□□□ 0.86
Cdh6P97326 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdh6P97326 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cdh6P97326 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdh6P97326 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cdh6P97326 Mir6236-201ENSMUST00000184437 123 ntBASIC20.4■□□□□ 0.86
Cdh6P97326 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdh6P97326 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Cdh6P97326 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdh6P97326 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cdh6P97326 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdh6P97326 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdh6P97326 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdh6P97326 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdh6P97326 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Cdh6P97326 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.39■□□□□ 0.85
Cdh6P97326 Gm13241-201ENSMUST00000094493 780 ntBASIC20.39■□□□□ 0.85
Cdh6P97326 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdh6P97326 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Cdh6P97326 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdh6P97326 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdh6P97326 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdh6P97326 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdh6P97326 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.38■□□□□ 0.85
Cdh6P97326 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.38■□□□□ 0.85
Cdh6P97326 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.38■□□□□ 0.85
Cdh6P97326 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdh6P97326 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Cdh6P97326 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdh6P97326 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdh6P97326 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cdh6P97326 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdh6P97326 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Cdh6P97326 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdh6P97326 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.36■□□□□ 0.85
Cdh6P97326 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.36■□□□□ 0.85
Cdh6P97326 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdh6P97326 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdh6P97326 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.36■□□□□ 0.85
Cdh6P97326 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.36■□□□□ 0.85
Cdh6P97326 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cdh6P97326 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdh6P97326 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdh6P97326 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Cdh6P97326 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Cdh6P97326 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Cdh6P97326 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdh6P97326 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdh6P97326 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdh6P97326 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdh6P97326 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cdh6P97326 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh6P97326 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh6P97326 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Cdh6P97326 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh6P97326 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh6P97326 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh6P97326 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh6P97326 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdh6P97326 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.33■□□□□ 0.85
Cdh6P97326 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cdh6P97326 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.33■□□□□ 0.85
Cdh6P97326 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.33■□□□□ 0.85
Cdh6P97326 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cdh6P97326 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cdh6P97326 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cdh6P97326 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh6P97326 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh6P97326 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh6P97326 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh6P97326 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh6P97326 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh6P97326 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Cdh6P97326 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms