Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm42699-201ENSMUST00000198104 1657 ntBASIC14.15□□□□□ -0.14
PrkdcP97313 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.15□□□□□ -0.14
PrkdcP97313 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
PrkdcP97313 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PrkdcP97313 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PrkdcP97313 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PrkdcP97313 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC14.15□□□□□ -0.14
PrkdcP97313 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PrkdcP97313 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PrkdcP97313 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PrkdcP97313 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PrkdcP97313 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PrkdcP97313 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.14□□□□□ -0.15
PrkdcP97313 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
PrkdcP97313 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
PrkdcP97313 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PrkdcP97313 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PrkdcP97313 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PrkdcP97313 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.14□□□□□ -0.15
PrkdcP97313 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC14.14□□□□□ -0.15
PrkdcP97313 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PrkdcP97313 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PrkdcP97313 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PrkdcP97313 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC14.13□□□□□ -0.15
PrkdcP97313 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.13□□□□□ -0.15
PrkdcP97313 AC153890.1-201ENSMUST00000220021 2469 ntBASIC14.13□□□□□ -0.15
PrkdcP97313 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PrkdcP97313 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PrkdcP97313 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.13□□□□□ -0.15
PrkdcP97313 AC122769.4-201ENSMUST00000228166 901 ntBASIC14.13□□□□□ -0.15
PrkdcP97313 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PrkdcP97313 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PrkdcP97313 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PrkdcP97313 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PrkdcP97313 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.13□□□□□ -0.15
PrkdcP97313 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PrkdcP97313 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.12□□□□□ -0.15
PrkdcP97313 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PrkdcP97313 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PrkdcP97313 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PrkdcP97313 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PrkdcP97313 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.12□□□□□ -0.15
PrkdcP97313 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PrkdcP97313 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PrkdcP97313 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PrkdcP97313 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PrkdcP97313 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PrkdcP97313 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
PrkdcP97313 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.12□□□□□ -0.15
PrkdcP97313 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PrkdcP97313 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PrkdcP97313 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
PrkdcP97313 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
PrkdcP97313 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PrkdcP97313 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.11□□□□□ -0.15
PrkdcP97313 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PrkdcP97313 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
PrkdcP97313 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PrkdcP97313 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PrkdcP97313 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.11□□□□□ -0.15
PrkdcP97313 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.11□□□□□ -0.15
PrkdcP97313 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PrkdcP97313 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PrkdcP97313 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
PrkdcP97313 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PrkdcP97313 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PrkdcP97313 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PrkdcP97313 AC115037.1-201ENSMUST00000223391 2173 ntBASIC14.1□□□□□ -0.15
PrkdcP97313 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PrkdcP97313 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PrkdcP97313 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
PrkdcP97313 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.1□□□□□ -0.15
PrkdcP97313 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
PrkdcP97313 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
PrkdcP97313 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PrkdcP97313 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PrkdcP97313 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PrkdcP97313 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PrkdcP97313 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PrkdcP97313 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PrkdcP97313 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PrkdcP97313 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
PrkdcP97313 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
PrkdcP97313 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
PrkdcP97313 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC14.09□□□□□ -0.15
PrkdcP97313 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PrkdcP97313 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.09□□□□□ -0.15
PrkdcP97313 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PrkdcP97313 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PrkdcP97313 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PrkdcP97313 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.09□□□□□ -0.15
PrkdcP97313 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PrkdcP97313 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PrkdcP97313 Gm26524-201ENSMUST00000192339 390 ntBASIC14.09□□□□□ -0.15
PrkdcP97313 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PrkdcP97313 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
PrkdcP97313 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PrkdcP97313 Gm15565-201ENSMUST00000118890 427 ntBASIC14.08□□□□□ -0.16
PrkdcP97313 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.08□□□□□ -0.16
PrkdcP97313 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms