Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
H3f3aP84244 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
H3f3aP84244 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
H3f3aP84244 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
H3f3aP84244 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
H3f3aP84244 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
H3f3aP84244 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
H3f3aP84244 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
H3f3aP84244 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.92■□□□□ 0.46
H3f3aP84244 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
H3f3aP84244 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
H3f3aP84244 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
H3f3aP84244 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
H3f3aP84244 Notumos-201ENSMUST00000151998 2659 ntBASIC17.92■□□□□ 0.46
H3f3aP84244 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
H3f3aP84244 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.91■□□□□ 0.46
H3f3aP84244 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
H3f3aP84244 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
H3f3aP84244 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.91■□□□□ 0.46
H3f3aP84244 Gm21956-201ENSMUST00000179946 522 ntBASIC17.91■□□□□ 0.46
H3f3aP84244 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.91■□□□□ 0.46
H3f3aP84244 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
H3f3aP84244 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
H3f3aP84244 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
H3f3aP84244 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
H3f3aP84244 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
H3f3aP84244 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
H3f3aP84244 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
H3f3aP84244 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
H3f3aP84244 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
H3f3aP84244 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
H3f3aP84244 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
H3f3aP84244 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
H3f3aP84244 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
H3f3aP84244 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
H3f3aP84244 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
H3f3aP84244 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
H3f3aP84244 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
H3f3aP84244 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H3f3aP84244 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H3f3aP84244 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
H3f3aP84244 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
H3f3aP84244 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.89■□□□□ 0.45
H3f3aP84244 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
H3f3aP84244 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H3f3aP84244 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
H3f3aP84244 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
H3f3aP84244 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
H3f3aP84244 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
H3f3aP84244 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
H3f3aP84244 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
H3f3aP84244 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
H3f3aP84244 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
H3f3aP84244 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
H3f3aP84244 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
H3f3aP84244 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
H3f3aP84244 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
H3f3aP84244 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
H3f3aP84244 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
H3f3aP84244 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.87■□□□□ 0.45
H3f3aP84244 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
H3f3aP84244 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.87■□□□□ 0.45
H3f3aP84244 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.87■□□□□ 0.45
H3f3aP84244 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
H3f3aP84244 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.87■□□□□ 0.45
H3f3aP84244 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
H3f3aP84244 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
H3f3aP84244 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
H3f3aP84244 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.86■□□□□ 0.45
H3f3aP84244 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
H3f3aP84244 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
H3f3aP84244 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H3f3aP84244 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
H3f3aP84244 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.86■□□□□ 0.45
H3f3aP84244 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.86■□□□□ 0.45
H3f3aP84244 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
H3f3aP84244 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H3f3aP84244 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
H3f3aP84244 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H3f3aP84244 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
H3f3aP84244 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H3f3aP84244 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
H3f3aP84244 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
H3f3aP84244 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
H3f3aP84244 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.85■□□□□ 0.45
H3f3aP84244 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.85■□□□□ 0.45
H3f3aP84244 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
H3f3aP84244 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
H3f3aP84244 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.85■□□□□ 0.45
H3f3aP84244 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
H3f3aP84244 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
H3f3aP84244 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
H3f3aP84244 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
H3f3aP84244 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
H3f3aP84244 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
H3f3aP84244 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
H3f3aP84244 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
H3f3aP84244 Mir6236-201ENSMUST00000184437 123 ntBASIC17.84■□□□□ 0.45
H3f3aP84244 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
H3f3aP84244 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms