Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Gm10399-202ENSMUST00000202768 748 ntBASIC19.77■□□□□ 0.76
Traf6P70196 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Traf6P70196 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Traf6P70196 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Traf6P70196 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Traf6P70196 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Traf6P70196 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Traf6P70196 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.76■□□□□ 0.75
Traf6P70196 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Traf6P70196 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Traf6P70196 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Traf6P70196 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.76■□□□□ 0.75
Traf6P70196 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Traf6P70196 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.76■□□□□ 0.75
Traf6P70196 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Traf6P70196 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Traf6P70196 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Traf6P70196 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Traf6P70196 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Traf6P70196 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Traf6P70196 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Traf6P70196 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.75■□□□□ 0.75
Traf6P70196 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Traf6P70196 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Traf6P70196 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Traf6P70196 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Traf6P70196 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Traf6P70196 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Traf6P70196 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Traf6P70196 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Traf6P70196 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Traf6P70196 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Traf6P70196 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Traf6P70196 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Traf6P70196 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.74■□□□□ 0.75
Traf6P70196 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Traf6P70196 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Traf6P70196 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Traf6P70196 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Traf6P70196 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Traf6P70196 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Traf6P70196 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.73■□□□□ 0.75
Traf6P70196 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Traf6P70196 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Traf6P70196 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Traf6P70196 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Traf6P70196 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Traf6P70196 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Traf6P70196 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Traf6P70196 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Traf6P70196 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Traf6P70196 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Traf6P70196 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Traf6P70196 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.73■□□□□ 0.75
Traf6P70196 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Traf6P70196 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Traf6P70196 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Traf6P70196 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Traf6P70196 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Traf6P70196 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Traf6P70196 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Traf6P70196 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Traf6P70196 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Traf6P70196 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Traf6P70196 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Traf6P70196 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Traf6P70196 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.72■□□□□ 0.75
Traf6P70196 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Traf6P70196 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Traf6P70196 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Traf6P70196 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Traf6P70196 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.72■□□□□ 0.75
Traf6P70196 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Traf6P70196 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Traf6P70196 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Traf6P70196 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Traf6P70196 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Traf6P70196 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Traf6P70196 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
Traf6P70196 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Traf6P70196 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.7■□□□□ 0.74
Traf6P70196 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.7■□□□□ 0.74
Traf6P70196 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.7■□□□□ 0.74
Traf6P70196 Gm15820-201ENSMUST00000201566 728 ntBASIC19.7■□□□□ 0.74
Traf6P70196 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Traf6P70196 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Traf6P70196 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Traf6P70196 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Traf6P70196 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Traf6P70196 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Traf6P70196 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.69■□□□□ 0.74
Traf6P70196 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.69■□□□□ 0.74
Traf6P70196 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Traf6P70196 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Traf6P70196 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Traf6P70196 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Traf6P70196 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Traf6P70196 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Traf6P70196 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Traf6P70196 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms