Protein–RNA interactions for Protein: P68404

Prkcb, Protein kinase C beta type, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcbP68404 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.83■■□□□ 1.08
PrkcbP68404 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PrkcbP68404 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PrkcbP68404 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.82■■□□□ 1.08
PrkcbP68404 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PrkcbP68404 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PrkcbP68404 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PrkcbP68404 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
PrkcbP68404 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PrkcbP68404 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PrkcbP68404 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PrkcbP68404 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
PrkcbP68404 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PrkcbP68404 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PrkcbP68404 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PrkcbP68404 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
PrkcbP68404 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PrkcbP68404 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.81■■□□□ 1.08
PrkcbP68404 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PrkcbP68404 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PrkcbP68404 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PrkcbP68404 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.8■■□□□ 1.08
PrkcbP68404 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PrkcbP68404 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.8■■□□□ 1.08
PrkcbP68404 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.8■■□□□ 1.08
PrkcbP68404 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.8■■□□□ 1.08
PrkcbP68404 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.8■■□□□ 1.08
PrkcbP68404 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
PrkcbP68404 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PrkcbP68404 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PrkcbP68404 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PrkcbP68404 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PrkcbP68404 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PrkcbP68404 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.79■■□□□ 1.08
PrkcbP68404 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.79■■□□□ 1.08
PrkcbP68404 Spcs1-204ENSMUST00000226782 949 ntBASIC21.79■■□□□ 1.08
PrkcbP68404 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PrkcbP68404 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PrkcbP68404 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PrkcbP68404 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PrkcbP68404 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PrkcbP68404 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
PrkcbP68404 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PrkcbP68404 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PrkcbP68404 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.78■■□□□ 1.08
PrkcbP68404 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.78■■□□□ 1.08
PrkcbP68404 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PrkcbP68404 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PrkcbP68404 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PrkcbP68404 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PrkcbP68404 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PrkcbP68404 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
PrkcbP68404 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PrkcbP68404 Gm43017-201ENSMUST00000198296 752 ntBASIC21.77■■□□□ 1.08
PrkcbP68404 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PrkcbP68404 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PrkcbP68404 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.77■■□□□ 1.08
PrkcbP68404 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
PrkcbP68404 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PrkcbP68404 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PrkcbP68404 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.76■■□□□ 1.07
PrkcbP68404 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PrkcbP68404 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PrkcbP68404 Gm43173-201ENSMUST00000202246 593 ntBASIC21.76■■□□□ 1.07
PrkcbP68404 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PrkcbP68404 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.76■■□□□ 1.07
PrkcbP68404 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PrkcbP68404 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PrkcbP68404 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PrkcbP68404 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.75■■□□□ 1.07
PrkcbP68404 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
PrkcbP68404 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PrkcbP68404 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PrkcbP68404 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
PrkcbP68404 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PrkcbP68404 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PrkcbP68404 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PrkcbP68404 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PrkcbP68404 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PrkcbP68404 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.74■■□□□ 1.07
PrkcbP68404 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.74■■□□□ 1.07
PrkcbP68404 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PrkcbP68404 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PrkcbP68404 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
PrkcbP68404 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PrkcbP68404 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PrkcbP68404 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PrkcbP68404 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PrkcbP68404 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
PrkcbP68404 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PrkcbP68404 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.73■■□□□ 1.07
PrkcbP68404 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PrkcbP68404 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.73■■□□□ 1.07
PrkcbP68404 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PrkcbP68404 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PrkcbP68404 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PrkcbP68404 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PrkcbP68404 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PrkcbP68404 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
PrkcbP68404 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms