Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ybx1P62960 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ybx1P62960 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ybx1P62960 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ybx1P62960 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.74■□□□□ 0.91
Ybx1P62960 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ybx1P62960 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.73■□□□□ 0.91
Ybx1P62960 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ybx1P62960 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.73■□□□□ 0.91
Ybx1P62960 Gm10849-201ENSMUST00000100397 618 ntBASIC20.73■□□□□ 0.91
Ybx1P62960 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ybx1P62960 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.73■□□□□ 0.91
Ybx1P62960 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.73■□□□□ 0.91
Ybx1P62960 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.73■□□□□ 0.91
Ybx1P62960 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ybx1P62960 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ybx1P62960 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ybx1P62960 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ybx1P62960 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ybx1P62960 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.73■□□□□ 0.91
Ybx1P62960 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ybx1P62960 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ybx1P62960 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ybx1P62960 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.72■□□□□ 0.91
Ybx1P62960 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ybx1P62960 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ybx1P62960 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.72■□□□□ 0.91
Ybx1P62960 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ybx1P62960 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ybx1P62960 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ybx1P62960 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.72■□□□□ 0.91
Ybx1P62960 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ybx1P62960 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ybx1P62960 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Ybx1P62960 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ybx1P62960 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Ybx1P62960 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ybx1P62960 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.71■□□□□ 0.91
Ybx1P62960 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Ybx1P62960 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ybx1P62960 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ybx1P62960 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ybx1P62960 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ybx1P62960 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.7■□□□□ 0.9
Ybx1P62960 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.7■□□□□ 0.9
Ybx1P62960 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ybx1P62960 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.7■□□□□ 0.9
Ybx1P62960 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ybx1P62960 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ybx1P62960 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.7■□□□□ 0.9
Ybx1P62960 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ybx1P62960 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ybx1P62960 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Ybx1P62960 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ybx1P62960 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ybx1P62960 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ybx1P62960 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.69■□□□□ 0.9
Ybx1P62960 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ybx1P62960 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ybx1P62960 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.69■□□□□ 0.9
Ybx1P62960 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ybx1P62960 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ybx1P62960 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ybx1P62960 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ybx1P62960 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ybx1P62960 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Ybx1P62960 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ybx1P62960 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ybx1P62960 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ybx1P62960 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Ybx1P62960 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ybx1P62960 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Ybx1P62960 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.67■□□□□ 0.9
Ybx1P62960 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ybx1P62960 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.67■□□□□ 0.9
Ybx1P62960 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Ybx1P62960 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ybx1P62960 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ybx1P62960 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ybx1P62960 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.67■□□□□ 0.9
Ybx1P62960 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ybx1P62960 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ybx1P62960 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ybx1P62960 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ybx1P62960 Gm37179-201ENSMUST00000194862 823 ntBASIC20.66■□□□□ 0.9
Ybx1P62960 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ybx1P62960 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Ybx1P62960 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Ybx1P62960 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ybx1P62960 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.66■□□□□ 0.9
Ybx1P62960 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ybx1P62960 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Ybx1P62960 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Ybx1P62960 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ybx1P62960 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ybx1P62960 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ybx1P62960 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ybx1P62960 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Ybx1P62960 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.65■□□□□ 0.9
Ybx1P62960 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms