Protein–RNA interactions for Protein: P59326

Ythdf1, YTH domain-containing family protein 1, mousemouse

Known RBP Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ythdf1P59326 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ythdf1P59326 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ythdf1P59326 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ythdf1P59326 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ythdf1P59326 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Ythdf1P59326 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ythdf1P59326 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ythdf1P59326 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ythdf1P59326 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.4■□□□□ 0.7
Ythdf1P59326 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.39■□□□□ 0.7
Ythdf1P59326 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ythdf1P59326 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ythdf1P59326 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.39■□□□□ 0.69
Ythdf1P59326 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ythdf1P59326 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ythdf1P59326 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ythdf1P59326 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ythdf1P59326 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ythdf1P59326 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ythdf1P59326 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ythdf1P59326 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ythdf1P59326 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ythdf1P59326 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ythdf1P59326 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ythdf1P59326 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ythdf1P59326 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ythdf1P59326 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ythdf1P59326 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ythdf1P59326 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ythdf1P59326 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Ythdf1P59326 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ythdf1P59326 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ythdf1P59326 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.37■□□□□ 0.69
Ythdf1P59326 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ythdf1P59326 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ythdf1P59326 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ythdf1P59326 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ythdf1P59326 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ythdf1P59326 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ythdf1P59326 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.36■□□□□ 0.69
Ythdf1P59326 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Ythdf1P59326 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ythdf1P59326 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ythdf1P59326 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Ythdf1P59326 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ythdf1P59326 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ythdf1P59326 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ythdf1P59326 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ythdf1P59326 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Ythdf1P59326 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.35■□□□□ 0.69
Ythdf1P59326 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.35■□□□□ 0.69
Ythdf1P59326 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ythdf1P59326 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Ythdf1P59326 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ythdf1P59326 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ythdf1P59326 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.34■□□□□ 0.69
Ythdf1P59326 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ythdf1P59326 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Ythdf1P59326 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ythdf1P59326 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ythdf1P59326 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ythdf1P59326 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ythdf1P59326 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ythdf1P59326 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ythdf1P59326 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.33■□□□□ 0.69
Ythdf1P59326 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ythdf1P59326 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ythdf1P59326 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ythdf1P59326 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ythdf1P59326 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ythdf1P59326 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ythdf1P59326 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ythdf1P59326 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ythdf1P59326 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ythdf1P59326 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ythdf1P59326 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Ythdf1P59326 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.32■□□□□ 0.68
Ythdf1P59326 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ythdf1P59326 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ythdf1P59326 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ythdf1P59326 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ythdf1P59326 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ythdf1P59326 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ythdf1P59326 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ythdf1P59326 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ythdf1P59326 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Ythdf1P59326 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ythdf1P59326 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Ythdf1P59326 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ythdf1P59326 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ythdf1P59326 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.31■□□□□ 0.68
Ythdf1P59326 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.3■□□□□ 0.68
Ythdf1P59326 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ythdf1P59326 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ythdf1P59326 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ythdf1P59326 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ythdf1P59326 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ythdf1P59326 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.3■□□□□ 0.68
Ythdf1P59326 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ythdf1P59326 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms