Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Tpm1P58771 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Tpm1P58771 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Tpm1P58771 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC22.35■■□□□ 1.17
Tpm1P58771 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC22.35■■□□□ 1.17
Tpm1P58771 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Tpm1P58771 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Tpm1P58771 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Tpm1P58771 Gm28536-201ENSMUST00000190971 1317 ntBASIC22.34■■□□□ 1.17
Tpm1P58771 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Tpm1P58771 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Tpm1P58771 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Tpm1P58771 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Tpm1P58771 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Tpm1P58771 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Tpm1P58771 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Tpm1P58771 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC22.34■■□□□ 1.17
Tpm1P58771 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Tpm1P58771 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Tpm1P58771 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Tpm1P58771 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC22.33■■□□□ 1.17
Tpm1P58771 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.17
Tpm1P58771 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Tpm1P58771 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Tpm1P58771 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Tpm1P58771 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Tpm1P58771 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Tpm1P58771 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Tpm1P58771 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Tpm1P58771 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Tpm1P58771 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Tpm1P58771 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC22.32■■□□□ 1.16
Tpm1P58771 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Tpm1P58771 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Tpm1P58771 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
Tpm1P58771 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC22.32■■□□□ 1.16
Tpm1P58771 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tpm1P58771 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tpm1P58771 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tpm1P58771 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Tpm1P58771 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tpm1P58771 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Tpm1P58771 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Tpm1P58771 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Tpm1P58771 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC22.31■■□□□ 1.16
Tpm1P58771 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Tpm1P58771 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC22.31■■□□□ 1.16
Tpm1P58771 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Tpm1P58771 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Tpm1P58771 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Tpm1P58771 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Tpm1P58771 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Tpm1P58771 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC22.3■■□□□ 1.16
Tpm1P58771 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Tpm1P58771 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Tpm1P58771 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Tpm1P58771 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.3■■□□□ 1.16
Tpm1P58771 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Tpm1P58771 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Tpm1P58771 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC22.3■■□□□ 1.16
Tpm1P58771 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Tpm1P58771 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Tpm1P58771 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC22.29■■□□□ 1.16
Tpm1P58771 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Tpm1P58771 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Tpm1P58771 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Tpm1P58771 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Tpm1P58771 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Tpm1P58771 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Tpm1P58771 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC22.29■■□□□ 1.16
Tpm1P58771 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Tpm1P58771 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Tpm1P58771 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Tpm1P58771 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Tpm1P58771 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Tpm1P58771 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Tpm1P58771 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Tpm1P58771 Gm10420-201ENSMUST00000121713 882 ntBASIC22.28■■□□□ 1.16
Tpm1P58771 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.28■■□□□ 1.16
Tpm1P58771 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Tpm1P58771 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Tpm1P58771 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Tpm1P58771 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Tpm1P58771 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Tpm1P58771 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Tpm1P58771 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Tpm1P58771 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
Tpm1P58771 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Tpm1P58771 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Tpm1P58771 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Tpm1P58771 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Tpm1P58771 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Tpm1P58771 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Tpm1P58771 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Tpm1P58771 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Tpm1P58771 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Tpm1P58771 Dapk1-207ENSMUST00000226059 5009 ntBASIC22.26■■□□□ 1.15
Tpm1P58771 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Tpm1P58771 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Tpm1P58771 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms