Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh11P55288 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh11P55288 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh11P55288 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh11P55288 Gm40881-201ENSMUST00000223397 166 ntBASIC18.24■□□□□ 0.51
Cdh11P55288 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh11P55288 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh11P55288 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.24■□□□□ 0.51
Cdh11P55288 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Cdh11P55288 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh11P55288 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Cdh11P55288 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.23■□□□□ 0.51
Cdh11P55288 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh11P55288 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh11P55288 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh11P55288 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh11P55288 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh11P55288 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh11P55288 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Cdh11P55288 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh11P55288 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh11P55288 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.22■□□□□ 0.51
Cdh11P55288 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh11P55288 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh11P55288 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh11P55288 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.22■□□□□ 0.51
Cdh11P55288 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh11P55288 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh11P55288 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.21■□□□□ 0.51
Cdh11P55288 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh11P55288 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh11P55288 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh11P55288 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh11P55288 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.21■□□□□ 0.51
Cdh11P55288 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.21■□□□□ 0.51
Cdh11P55288 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.21■□□□□ 0.51
Cdh11P55288 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Cdh11P55288 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh11P55288 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.21■□□□□ 0.51
Cdh11P55288 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh11P55288 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Cdh11P55288 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh11P55288 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.21■□□□□ 0.51
Cdh11P55288 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh11P55288 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
Cdh11P55288 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh11P55288 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh11P55288 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Cdh11P55288 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Cdh11P55288 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.2■□□□□ 0.5
Cdh11P55288 Gm10399-202ENSMUST00000202768 748 ntBASIC18.2■□□□□ 0.5
Cdh11P55288 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh11P55288 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh11P55288 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh11P55288 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh11P55288 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh11P55288 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh11P55288 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Cdh11P55288 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh11P55288 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh11P55288 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh11P55288 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh11P55288 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.19■□□□□ 0.5
Cdh11P55288 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Cdh11P55288 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Cdh11P55288 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh11P55288 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Cdh11P55288 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh11P55288 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh11P55288 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Cdh11P55288 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh11P55288 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh11P55288 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh11P55288 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh11P55288 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Cdh11P55288 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh11P55288 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.18■□□□□ 0.5
Cdh11P55288 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh11P55288 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh11P55288 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Cdh11P55288 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh11P55288 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.18■□□□□ 0.5
Cdh11P55288 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh11P55288 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh11P55288 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cdh11P55288 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh11P55288 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.17■□□□□ 0.5
Cdh11P55288 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.17■□□□□ 0.5
Cdh11P55288 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh11P55288 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh11P55288 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh11P55288 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh11P55288 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh11P55288 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh11P55288 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh11P55288 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh11P55288 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh11P55288 Gm15039-201ENSMUST00000118914 875 ntBASIC18.16■□□□□ 0.5
Cdh11P55288 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh11P55288 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms