Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GdnfP48540 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
GdnfP48540 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.53■□□□□ 0.4
GdnfP48540 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GdnfP48540 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GdnfP48540 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GdnfP48540 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
GdnfP48540 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GdnfP48540 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GdnfP48540 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
GdnfP48540 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
GdnfP48540 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.52■□□□□ 0.4
GdnfP48540 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.52■□□□□ 0.4
GdnfP48540 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.52■□□□□ 0.4
GdnfP48540 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GdnfP48540 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
GdnfP48540 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
GdnfP48540 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
GdnfP48540 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
GdnfP48540 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.52■□□□□ 0.39
GdnfP48540 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GdnfP48540 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GdnfP48540 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GdnfP48540 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GdnfP48540 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.51■□□□□ 0.39
GdnfP48540 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
GdnfP48540 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GdnfP48540 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GdnfP48540 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
GdnfP48540 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GdnfP48540 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.5■□□□□ 0.39
GdnfP48540 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GdnfP48540 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
GdnfP48540 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GdnfP48540 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
GdnfP48540 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
GdnfP48540 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
GdnfP48540 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GdnfP48540 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
GdnfP48540 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
GdnfP48540 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
GdnfP48540 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GdnfP48540 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
GdnfP48540 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
GdnfP48540 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GdnfP48540 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GdnfP48540 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
GdnfP48540 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GdnfP48540 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GdnfP48540 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
GdnfP48540 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GdnfP48540 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GdnfP48540 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
GdnfP48540 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GdnfP48540 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GdnfP48540 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
GdnfP48540 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GdnfP48540 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.48■□□□□ 0.39
GdnfP48540 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
GdnfP48540 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.48■□□□□ 0.39
GdnfP48540 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GdnfP48540 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GdnfP48540 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
GdnfP48540 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GdnfP48540 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
GdnfP48540 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
GdnfP48540 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GdnfP48540 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GdnfP48540 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GdnfP48540 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
GdnfP48540 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
GdnfP48540 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GdnfP48540 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.47■□□□□ 0.39
GdnfP48540 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
GdnfP48540 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.47■□□□□ 0.39
GdnfP48540 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.47■□□□□ 0.39
GdnfP48540 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GdnfP48540 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GdnfP48540 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
GdnfP48540 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GdnfP48540 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
GdnfP48540 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GdnfP48540 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
GdnfP48540 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GdnfP48540 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GdnfP48540 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.46■□□□□ 0.39
GdnfP48540 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GdnfP48540 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.46■□□□□ 0.39
GdnfP48540 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GdnfP48540 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
GdnfP48540 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GdnfP48540 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.46■□□□□ 0.39
GdnfP48540 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GdnfP48540 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GdnfP48540 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GdnfP48540 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GdnfP48540 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GdnfP48540 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
GdnfP48540 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GdnfP48540 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 222.1 ms