Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Nkx2-6P43688 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx2-6P43688 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx2-6P43688 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.05■□□□□ 0.64
Nkx2-6P43688 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx2-6P43688 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Nkx2-6P43688 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx2-6P43688 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx2-6P43688 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
Nkx2-6P43688 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx2-6P43688 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx2-6P43688 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx2-6P43688 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx2-6P43688 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.04■□□□□ 0.64
Nkx2-6P43688 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.04■□□□□ 0.64
Nkx2-6P43688 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx2-6P43688 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx2-6P43688 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx2-6P43688 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.04■□□□□ 0.64
Nkx2-6P43688 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Nkx2-6P43688 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx2-6P43688 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Nkx2-6P43688 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx2-6P43688 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.03■□□□□ 0.64
Nkx2-6P43688 Gm26833-201ENSMUST00000180899 440 ntBASIC19.03■□□□□ 0.64
Nkx2-6P43688 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.03■□□□□ 0.64
Nkx2-6P43688 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx2-6P43688 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx2-6P43688 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx2-6P43688 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Nkx2-6P43688 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx2-6P43688 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Nkx2-6P43688 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx2-6P43688 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Nkx2-6P43688 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.02■□□□□ 0.64
Nkx2-6P43688 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx2-6P43688 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx2-6P43688 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Nkx2-6P43688 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Nkx2-6P43688 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nkx2-6P43688 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nkx2-6P43688 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx2-6P43688 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.01■□□□□ 0.63
Nkx2-6P43688 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx2-6P43688 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Nkx2-6P43688 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx2-6P43688 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx2-6P43688 Gm5874-201ENSMUST00000096101 508 ntBASIC19.01■□□□□ 0.63
Nkx2-6P43688 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx2-6P43688 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx2-6P43688 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx2-6P43688 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx2-6P43688 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx2-6P43688 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx2-6P43688 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nkx2-6P43688 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx2-6P43688 Hsf1-207ENSMUST00000228371 2102 ntBASIC19■□□□□ 0.63
Nkx2-6P43688 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx2-6P43688 Gm10209-201ENSMUST00000203397 1607 ntBASIC19■□□□□ 0.63
Nkx2-6P43688 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Nkx2-6P43688 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Nkx2-6P43688 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx2-6P43688 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.99■□□□□ 0.63
Nkx2-6P43688 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx2-6P43688 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx2-6P43688 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx2-6P43688 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx2-6P43688 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx2-6P43688 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx2-6P43688 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Nkx2-6P43688 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.98■□□□□ 0.63
Nkx2-6P43688 Gm43060-201ENSMUST00000200621 289 ntBASIC18.98■□□□□ 0.63
Nkx2-6P43688 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
Nkx2-6P43688 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.98■□□□□ 0.63
Nkx2-6P43688 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx2-6P43688 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx2-6P43688 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx2-6P43688 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx2-6P43688 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx2-6P43688 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx2-6P43688 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx2-6P43688 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.97■□□□□ 0.63
Nkx2-6P43688 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx2-6P43688 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx2-6P43688 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Nkx2-6P43688 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx2-6P43688 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx2-6P43688 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx2-6P43688 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx2-6P43688 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx2-6P43688 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx2-6P43688 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.96■□□□□ 0.63
Nkx2-6P43688 Smad6-203ENSMUST00000179458 273 ntBASIC18.96■□□□□ 0.63
Nkx2-6P43688 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Nkx2-6P43688 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.96■□□□□ 0.63
Nkx2-6P43688 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.96■□□□□ 0.63
Nkx2-6P43688 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx2-6P43688 Gm10493-201ENSMUST00000097270 612 ntBASIC18.96■□□□□ 0.63
Nkx2-6P43688 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Nkx2-6P43688 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms