Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Hist1h1aP43275 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hist1h1aP43275 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hist1h1aP43275 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Hist1h1aP43275 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hist1h1aP43275 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Hist1h1aP43275 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.52■□□□□ 0.24
Hist1h1aP43275 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hist1h1aP43275 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hist1h1aP43275 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hist1h1aP43275 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hist1h1aP43275 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hist1h1aP43275 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hist1h1aP43275 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hist1h1aP43275 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Hist1h1aP43275 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Hist1h1aP43275 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hist1h1aP43275 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hist1h1aP43275 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hist1h1aP43275 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.51■□□□□ 0.23
Hist1h1aP43275 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hist1h1aP43275 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hist1h1aP43275 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hist1h1aP43275 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Hist1h1aP43275 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hist1h1aP43275 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hist1h1aP43275 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h1aP43275 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h1aP43275 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h1aP43275 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h1aP43275 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.5■□□□□ 0.23
Hist1h1aP43275 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.5■□□□□ 0.23
Hist1h1aP43275 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h1aP43275 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h1aP43275 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h1aP43275 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h1aP43275 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h1aP43275 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h1aP43275 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Hist1h1aP43275 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h1aP43275 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h1aP43275 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.49■□□□□ 0.23
Hist1h1aP43275 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h1aP43275 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h1aP43275 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h1aP43275 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h1aP43275 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.49■□□□□ 0.23
Hist1h1aP43275 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h1aP43275 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h1aP43275 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC16.49■□□□□ 0.23
Hist1h1aP43275 Gm45444-201ENSMUST00000211394 898 ntBASIC16.49■□□□□ 0.23
Hist1h1aP43275 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Hist1h1aP43275 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.49■□□□□ 0.23
Hist1h1aP43275 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Hist1h1aP43275 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Hist1h1aP43275 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h1aP43275 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h1aP43275 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h1aP43275 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.48■□□□□ 0.23
Hist1h1aP43275 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h1aP43275 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Hist1h1aP43275 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Hist1h1aP43275 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.48■□□□□ 0.23
Hist1h1aP43275 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h1aP43275 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h1aP43275 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h1aP43275 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.48■□□□□ 0.23
Hist1h1aP43275 Cap2-205ENSMUST00000225824 1634 ntBASIC16.48■□□□□ 0.23
Hist1h1aP43275 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h1aP43275 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h1aP43275 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hist1h1aP43275 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hist1h1aP43275 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Hist1h1aP43275 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hist1h1aP43275 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hist1h1aP43275 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Hist1h1aP43275 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hist1h1aP43275 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Hist1h1aP43275 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hist1h1aP43275 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hist1h1aP43275 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hist1h1aP43275 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.47■□□□□ 0.23
Hist1h1aP43275 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Hist1h1aP43275 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.47■□□□□ 0.23
Hist1h1aP43275 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hist1h1aP43275 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Hist1h1aP43275 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hist1h1aP43275 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hist1h1aP43275 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hist1h1aP43275 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.46■□□□□ 0.23
Hist1h1aP43275 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hist1h1aP43275 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.46■□□□□ 0.23
Hist1h1aP43275 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Hist1h1aP43275 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hist1h1aP43275 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hist1h1aP43275 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.46■□□□□ 0.22
Hist1h1aP43275 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Hist1h1aP43275 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hist1h1aP43275 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hist1h1aP43275 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms