Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Msh2P43247 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Msh2P43247 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Msh2P43247 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Msh2P43247 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.71■□□□□ 0.91
Msh2P43247 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Msh2P43247 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Msh2P43247 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.71■□□□□ 0.91
Msh2P43247 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Msh2P43247 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Msh2P43247 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Msh2P43247 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Msh2P43247 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Msh2P43247 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Msh2P43247 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Msh2P43247 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.7■□□□□ 0.9
Msh2P43247 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.7■□□□□ 0.9
Msh2P43247 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.7■□□□□ 0.9
Msh2P43247 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Msh2P43247 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Msh2P43247 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Msh2P43247 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Msh2P43247 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Msh2P43247 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Msh2P43247 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.69■□□□□ 0.9
Msh2P43247 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Msh2P43247 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Msh2P43247 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Msh2P43247 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Msh2P43247 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Msh2P43247 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Msh2P43247 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Msh2P43247 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.68■□□□□ 0.9
Msh2P43247 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Msh2P43247 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Msh2P43247 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.68■□□□□ 0.9
Msh2P43247 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.68■□□□□ 0.9
Msh2P43247 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Msh2P43247 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Msh2P43247 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Msh2P43247 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.68■□□□□ 0.9
Msh2P43247 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Msh2P43247 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Msh2P43247 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Msh2P43247 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Msh2P43247 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.67■□□□□ 0.9
Msh2P43247 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Msh2P43247 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Msh2P43247 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.67■□□□□ 0.9
Msh2P43247 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Msh2P43247 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Msh2P43247 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.67■□□□□ 0.9
Msh2P43247 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Msh2P43247 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Msh2P43247 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Msh2P43247 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Msh2P43247 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.66■□□□□ 0.9
Msh2P43247 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Msh2P43247 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.65■□□□□ 0.9
Msh2P43247 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Msh2P43247 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Msh2P43247 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Msh2P43247 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Msh2P43247 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Msh2P43247 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Msh2P43247 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.65■□□□□ 0.9
Msh2P43247 Gm10399-202ENSMUST00000202768 748 ntBASIC20.65■□□□□ 0.9
Msh2P43247 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Msh2P43247 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Msh2P43247 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Msh2P43247 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Msh2P43247 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Msh2P43247 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Msh2P43247 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Msh2P43247 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Msh2P43247 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Msh2P43247 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Msh2P43247 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Msh2P43247 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Msh2P43247 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Msh2P43247 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Msh2P43247 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.63■□□□□ 0.89
Msh2P43247 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Msh2P43247 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Msh2P43247 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Msh2P43247 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Msh2P43247 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Msh2P43247 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.63■□□□□ 0.89
Msh2P43247 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Msh2P43247 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Msh2P43247 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Msh2P43247 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Msh2P43247 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Msh2P43247 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Msh2P43247 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Msh2P43247 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Msh2P43247 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.61■□□□□ 0.89
Msh2P43247 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Msh2P43247 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Msh2P43247 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms