Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfsf9P41274 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.26■□□□□ 0.67
Tnfsf9P41274 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfsf9P41274 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfsf9P41274 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfsf9P41274 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfsf9P41274 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfsf9P41274 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfsf9P41274 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfsf9P41274 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfsf9P41274 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfsf9P41274 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.25■□□□□ 0.67
Tnfsf9P41274 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfsf9P41274 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfsf9P41274 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfsf9P41274 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfsf9P41274 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfsf9P41274 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Tnfsf9P41274 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Tnfsf9P41274 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfsf9P41274 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfsf9P41274 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Tnfsf9P41274 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfsf9P41274 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Tnfsf9P41274 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfsf9P41274 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfsf9P41274 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfsf9P41274 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfsf9P41274 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfsf9P41274 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfsf9P41274 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfsf9P41274 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Tnfsf9P41274 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfsf9P41274 Spcs1-204ENSMUST00000226782 949 ntBASIC19.23■□□□□ 0.67
Tnfsf9P41274 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.23■□□□□ 0.67
Tnfsf9P41274 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfsf9P41274 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfsf9P41274 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfsf9P41274 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
Tnfsf9P41274 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfsf9P41274 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfsf9P41274 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfsf9P41274 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.22■□□□□ 0.67
Tnfsf9P41274 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Tnfsf9P41274 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfsf9P41274 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfsf9P41274 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.22■□□□□ 0.67
Tnfsf9P41274 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfsf9P41274 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Tnfsf9P41274 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfsf9P41274 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Tnfsf9P41274 Gm12251-201ENSMUST00000117893 792 ntBASIC19.21■□□□□ 0.67
Tnfsf9P41274 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Tnfsf9P41274 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Tnfsf9P41274 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.21■□□□□ 0.67
Tnfsf9P41274 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Tnfsf9P41274 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfsf9P41274 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfsf9P41274 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfsf9P41274 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfsf9P41274 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfsf9P41274 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.2■□□□□ 0.66
Tnfsf9P41274 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfsf9P41274 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfsf9P41274 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfsf9P41274 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfsf9P41274 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfsf9P41274 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfsf9P41274 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Tnfsf9P41274 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Tnfsf9P41274 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfsf9P41274 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Tnfsf9P41274 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfsf9P41274 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfsf9P41274 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfsf9P41274 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfsf9P41274 Mir6236-201ENSMUST00000184437 123 ntBASIC19.19■□□□□ 0.66
Tnfsf9P41274 Gm43173-201ENSMUST00000202246 593 ntBASIC19.19■□□□□ 0.66
Tnfsf9P41274 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfsf9P41274 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfsf9P41274 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.19■□□□□ 0.66
Tnfsf9P41274 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Tnfsf9P41274 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfsf9P41274 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfsf9P41274 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfsf9P41274 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfsf9P41274 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfsf9P41274 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfsf9P41274 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.18■□□□□ 0.66
Tnfsf9P41274 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfsf9P41274 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfsf9P41274 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfsf9P41274 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfsf9P41274 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfsf9P41274 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfsf9P41274 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfsf9P41274 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfsf9P41274 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.17■□□□□ 0.66
Tnfsf9P41274 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
Tnfsf9P41274 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms