Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox6P40645 Gm10399-202ENSMUST00000202768 748 ntBASIC18.76■□□□□ 0.59
Sox6P40645 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox6P40645 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox6P40645 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox6P40645 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox6P40645 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sox6P40645 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Sox6P40645 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox6P40645 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox6P40645 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox6P40645 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox6P40645 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Sox6P40645 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sox6P40645 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.75■□□□□ 0.59
Sox6P40645 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox6P40645 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.74■□□□□ 0.59
Sox6P40645 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox6P40645 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox6P40645 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox6P40645 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.74■□□□□ 0.59
Sox6P40645 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.74■□□□□ 0.59
Sox6P40645 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.74■□□□□ 0.59
Sox6P40645 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.74■□□□□ 0.59
Sox6P40645 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox6P40645 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Sox6P40645 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox6P40645 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Sox6P40645 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sox6P40645 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox6P40645 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox6P40645 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox6P40645 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.73■□□□□ 0.59
Sox6P40645 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Sox6P40645 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Sox6P40645 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sox6P40645 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.73■□□□□ 0.59
Sox6P40645 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Sox6P40645 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Sox6P40645 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox6P40645 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Sox6P40645 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox6P40645 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox6P40645 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox6P40645 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox6P40645 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox6P40645 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox6P40645 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox6P40645 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox6P40645 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox6P40645 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Sox6P40645 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Sox6P40645 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Sox6P40645 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.71■□□□□ 0.59
Sox6P40645 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.71■□□□□ 0.59
Sox6P40645 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox6P40645 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox6P40645 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox6P40645 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox6P40645 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sox6P40645 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox6P40645 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox6P40645 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.71■□□□□ 0.59
Sox6P40645 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sox6P40645 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox6P40645 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox6P40645 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Sox6P40645 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sox6P40645 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox6P40645 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sox6P40645 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.7■□□□□ 0.58
Sox6P40645 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox6P40645 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.7■□□□□ 0.58
Sox6P40645 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox6P40645 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox6P40645 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox6P40645 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox6P40645 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Sox6P40645 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox6P40645 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox6P40645 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox6P40645 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Sox6P40645 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox6P40645 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox6P40645 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Sox6P40645 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox6P40645 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox6P40645 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox6P40645 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.68■□□□□ 0.58
Sox6P40645 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.68■□□□□ 0.58
Sox6P40645 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox6P40645 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox6P40645 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.68■□□□□ 0.58
Sox6P40645 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox6P40645 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox6P40645 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sox6P40645 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.67■□□□□ 0.58
Sox6P40645 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox6P40645 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox6P40645 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms