Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
PdgfbP31240 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PdgfbP31240 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
PdgfbP31240 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PdgfbP31240 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.43■□□□□ 0.86
PdgfbP31240 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PdgfbP31240 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PdgfbP31240 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PdgfbP31240 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PdgfbP31240 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PdgfbP31240 Gm7514-201ENSMUST00000209475 934 ntBASIC20.42■□□□□ 0.86
PdgfbP31240 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PdgfbP31240 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PdgfbP31240 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PdgfbP31240 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
PdgfbP31240 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PdgfbP31240 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
PdgfbP31240 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PdgfbP31240 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.41■□□□□ 0.86
PdgfbP31240 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.41■□□□□ 0.86
PdgfbP31240 Gm10252-201ENSMUST00000209541 832 ntBASIC20.41■□□□□ 0.86
PdgfbP31240 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PdgfbP31240 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
PdgfbP31240 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PdgfbP31240 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PdgfbP31240 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PdgfbP31240 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PdgfbP31240 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
PdgfbP31240 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.4■□□□□ 0.86
PdgfbP31240 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.4■□□□□ 0.86
PdgfbP31240 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PdgfbP31240 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PdgfbP31240 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PdgfbP31240 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PdgfbP31240 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
PdgfbP31240 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PdgfbP31240 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PdgfbP31240 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PdgfbP31240 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PdgfbP31240 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PdgfbP31240 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
PdgfbP31240 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PdgfbP31240 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PdgfbP31240 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PdgfbP31240 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PdgfbP31240 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PdgfbP31240 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.38■□□□□ 0.85
PdgfbP31240 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PdgfbP31240 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.38■□□□□ 0.85
PdgfbP31240 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PdgfbP31240 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.38■□□□□ 0.85
PdgfbP31240 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PdgfbP31240 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PdgfbP31240 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PdgfbP31240 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PdgfbP31240 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
PdgfbP31240 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PdgfbP31240 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PdgfbP31240 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
PdgfbP31240 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.37■□□□□ 0.85
PdgfbP31240 Gm4968-201ENSMUST00000071458 858 ntBASIC20.37■□□□□ 0.85
PdgfbP31240 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.36■□□□□ 0.85
PdgfbP31240 Mir5133-201ENSMUST00000174955 77 ntBASIC20.36■□□□□ 0.85
PdgfbP31240 Gm22240-201ENSMUST00000175225 82 ntBASIC20.36■□□□□ 0.85
PdgfbP31240 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
PdgfbP31240 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PdgfbP31240 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PdgfbP31240 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PdgfbP31240 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PdgfbP31240 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
PdgfbP31240 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PdgfbP31240 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.35■□□□□ 0.85
PdgfbP31240 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PdgfbP31240 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.35■□□□□ 0.85
PdgfbP31240 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
PdgfbP31240 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PdgfbP31240 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PdgfbP31240 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PdgfbP31240 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PdgfbP31240 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PdgfbP31240 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PdgfbP31240 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PdgfbP31240 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PdgfbP31240 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.34■□□□□ 0.85
PdgfbP31240 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PdgfbP31240 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PdgfbP31240 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PdgfbP31240 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PdgfbP31240 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PdgfbP31240 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.33■□□□□ 0.85
PdgfbP31240 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PdgfbP31240 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.33■□□□□ 0.85
PdgfbP31240 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.33■□□□□ 0.85
PdgfbP31240 Gm12527-201ENSMUST00000117967 564 ntBASIC20.33■□□□□ 0.85
PdgfbP31240 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
PdgfbP31240 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PdgfbP31240 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PdgfbP31240 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PdgfbP31240 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.32■□□□□ 0.84
PdgfbP31240 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms