Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Tnfrsf9P20334 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf9P20334 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf9P20334 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf9P20334 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf9P20334 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf9P20334 Gm7291-201ENSMUST00000199147 382 ntBASIC16.2■□□□□ 0.18
Tnfrsf9P20334 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf9P20334 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf9P20334 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf9P20334 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf9P20334 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf9P20334 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf9P20334 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf9P20334 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf9P20334 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf9P20334 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Tnfrsf9P20334 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf9P20334 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf9P20334 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf9P20334 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Tnfrsf9P20334 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf9P20334 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.19■□□□□ 0.18
Tnfrsf9P20334 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf9P20334 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf9P20334 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf9P20334 Gm32051-202ENSMUST00000197905 2385 ntBASIC16.19■□□□□ 0.18
Tnfrsf9P20334 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf9P20334 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf9P20334 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Tnfrsf9P20334 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf9P20334 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf9P20334 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf9P20334 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf9P20334 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf9P20334 AC115037.1-201ENSMUST00000223391 2173 ntBASIC16.18■□□□□ 0.18
Tnfrsf9P20334 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf9P20334 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Tnfrsf9P20334 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Tnfrsf9P20334 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf9P20334 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Tnfrsf9P20334 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf9P20334 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf9P20334 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Tnfrsf9P20334 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf9P20334 AC153962.1-201ENSMUST00000218530 1948 ntBASIC16.17■□□□□ 0.18
Tnfrsf9P20334 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Tnfrsf9P20334 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Tnfrsf9P20334 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Tnfrsf9P20334 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf9P20334 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf9P20334 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf9P20334 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf9P20334 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf9P20334 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf9P20334 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Tnfrsf9P20334 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf9P20334 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.16■□□□□ 0.18
Tnfrsf9P20334 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf9P20334 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf9P20334 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf9P20334 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf9P20334 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.15■□□□□ 0.18
Tnfrsf9P20334 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.15■□□□□ 0.18
Tnfrsf9P20334 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf9P20334 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf9P20334 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf9P20334 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Tnfrsf9P20334 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf9P20334 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Tnfrsf9P20334 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf9P20334 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf9P20334 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.14■□□□□ 0.17
Tnfrsf9P20334 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.14■□□□□ 0.17
Tnfrsf9P20334 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.14■□□□□ 0.17
Tnfrsf9P20334 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Tnfrsf9P20334 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf9P20334 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf9P20334 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Tnfrsf9P20334 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf9P20334 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.14■□□□□ 0.17
Tnfrsf9P20334 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf9P20334 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf9P20334 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf9P20334 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf9P20334 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnfrsf9P20334 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnfrsf9P20334 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnfrsf9P20334 Gm26571-201ENSMUST00000181399 666 ntBASIC16.13■□□□□ 0.17
Tnfrsf9P20334 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16.13■□□□□ 0.17
Tnfrsf9P20334 Gm42569-201ENSMUST00000200539 472 ntBASIC16.13■□□□□ 0.17
Tnfrsf9P20334 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.13■□□□□ 0.17
Tnfrsf9P20334 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnfrsf9P20334 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC16.13■□□□□ 0.17
Tnfrsf9P20334 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnfrsf9P20334 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Tnfrsf9P20334 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tnfrsf9P20334 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Tnfrsf9P20334 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnfrsf9P20334 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms